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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002796000
- symbol?: emp
- synonym:
- description?: extracellular matrix and plasma binding protein
- extracellular matrix and plasma binding protein
- extracellular matrix protein-binding adhesin Emp
- secretory extracellular matrix and plasma binding protein
- extracellular ECM and plasma binding protein
- extracellular matrix and plasma binding protein precursor, putative
- extracellular matrix protein-binding protein emp
- Extracellular ECM and plasma binding protein Emp
- Extracellular ECM and plasma binding protein mp
- extracellular matrix and plasma binding protein precursor
- extracellular matrix -binding protein emp
- extracellular matrix protein-binding protein emp (40 kDavitronectin-binding cell surface protein)
- Fibrinogen-binding protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3262929..3263957
- synteny block?: BlockID0019890
- occurrence?: in 97% of 34 strains
emp (empbp) : secretory extracellular matrix and plasminogen binding protein [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0768 (ssp)
08BA02176:
C248_0882
11819-97:
MS7_0841 (emp)
6850:
RSAU_000767 (emp)
71193:
ST398NM01_0869
ECT-R 2:
ECTR2_741
ED133:
SAOV_0830
ED98:
SAAV_0759 (empbp)
HO 5096 0412:
SAEMRSA15_07160
JH1:
SaurJH1_0830
JH9:
SaurJH9_0814
JKD6008:
SAA6008_00805 (ssp)
JKD6159:
SAA6159_00745 (ssp)
JSNZ:
JSNZ_000773 (emp)
LGA251:
SARLGA251_07210
M013:
M013TW_0780
MRSA252:
SAR0845
MSHR1132:
—
MSSA476:
SAS0754
Mu3:
SAHV_0809 (ssp)
Mu50:
SAV0813 (ssp)
MW2:
MW0767 (ssp)
RF122:
SAB0746
ST398:
SAPIG0869
T0131:
SAT0131_00890
TCH60:
HMPREF0772_12389 (empbp)
TW20:
SATW20_08640
USA300_TCH1516:
USA300HOU_0821 (emp)
VC40:
SAVC_03595
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGINKIIPAYDEFKNSPKVN
N315 MKKKLLVLTMSTLFATQLINSNHAKASVTESVDKKFVVPESGINKIIPAYDEFKNSPKVN
NCTC8325 MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGINKIIPAYDEFKNSPKVN
Newman MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGINKIIPAYDEFKNSPKVN
USA300_FPR3757 MKKKLLVLTMSTLFATQIMNSNHAKASVTESVDKKFVVPESGINKIIPAYDEFKNSPKVN
*****************::*****************************************
COL VSNLTDNKNFVASEDKLNKIADSSAASKIVDKNFVVPESKLGNIVPEYKEINNRVNVATN
N315 VSNLTDNKNFVVSEDKLNKIVDSSAASKIVDKNFAVPESKLGNIVPEYKEINNRVNVATN
NCTC8325 VSNLTDNKNFVASEDKLNKIADSSAASKIVDKNFVVPESKLGNIVPEYKEINNRVNVATN
Newman VSNLTDNKNFVASEDKLNKIADSSAASKIVDKNFVVPESKLGNIVPEYKEINNRVNVATN
USA300_FPR3757 VSNLTDNKNFVASEDKLNKIADSSAASKIVDKNFVVPESKLGNIVPEYKEINNRVNVATN
***********.********.*************.*************************
COL NPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAKDS
N315 NPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAKDS
NCTC8325 NPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAKDS
Newman NPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAKDS
USA300_FPR3757 NPASQQVDKHFVAKGPEVNRFITQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAKDS
************************************************************
COL INKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKFVTPGHASIKINHFCVVPQINSF
N315 INKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKFVTPGHASIKINHFCVVPQINSF
NCTC8325 INKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKFVTPGHASIKINHFCVVPQINSF
Newman INKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKFVTPGHASIKINHFCVVPQINSF
USA300_FPR3757 INKHFIVKPSESPRYTHPSQSLIIKHHFAVPGYHAHKFVTPGHASIKINHFCVVPQINSF
************************************************************
COL KVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYDYKYFYSYKVVKGVKKYFSFSQSNG
N315 KVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYDYKYFYSYKVVKGVKKYFSFSQSNG
NCTC8325 KVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYDYKYFYSYKVVKGVKKYFSFSQSNG
Newman KVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYDYKYFYSYKVVKGVKKYFSFSQSNG
USA300_FPR3757 KVIPPYGHNSHRMHVPSFQNNTTATHQNAKVNKAYDYKYFYSYKVVKGVKKYFSFSQSNG
************************************************************
COL YKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGSLPAPRV
N315 YKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGSLPAPRV
NCTC8325 YKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGSLPAPRV
Newman YKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGSLPAPRV
USA300_FPR3757 YKIGKPSLNIKNVNYQYAVPSYSPTHYVPEFKGSLPAPRV
****************************************
- ↑ M Hussain, K Becker, C von Eiff, J Schrenzel, G Peters, M Herrmann
Identification and characterization of a novel 38.5-kilodalton cell surface protein of Staphylococcus aureus with extended-spectrum binding activity for extracellular matrix and plasma proteins.
J Bacteriol: 2001, 183(23);6778-86
[PubMed:11698365] [WorldCat.org] [DOI] (P p)