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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002800000
- symbol?: nuc
- synonym:
- description?: thermonuclease
- thermonuclease
- thermonuclease precursor
- nuclease
- thermonuclease family protein
- thermonuclease-like protein
- micrococcal nuclease
- phage-encoded chromosome degrading nuclease YokF
- Staphylococcal nuclease
- staphylococcal thermonuclease precursor
- thermonuclease (TNase) (Micrococcal nuclease)(Staphylococcal nuclease)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3268873..3269562
- synteny block?: BlockID0019910
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0770
08BA02176:
C248_0884 (nuc)
11819-97:
MS7_0843 (nuc)
6850:
RSAU_000769
71193:
ST398NM01_0871
ECT-R 2:
ECTR2_743
ED133:
SAOV_0832 (nuc)
ED98:
SAAV_0761 (nuc)
HO 5096 0412:
SAEMRSA15_07180 (nuc)
JH1:
SaurJH1_0832
JH9:
SaurJH9_0816
JKD6008:
SAA6008_00807
JKD6159:
SAA6159_00747
LGA251:
SARLGA251_07230 (nuc)
M013:
M013TW_0782
MRSA252:
SAR0847 (nuc)
MSHR1132:
SAMSHR1132_07400
MSSA476:
SAS0756
Mu3:
SAHV_0811 (nuc)
Mu50:
SAV0815 (nuc)
MW2:
MW0769
RF122:
SAB0748 (nuc)
ST398:
SAPIG0871
T0131:
SAT0131_00892 (int)
TCH60:
HMPREF0772_12387 (nuc)
TW20:
SATW20_08660 (nuc)
USA300_TCH1516:
USA300HOU_0823 (nuc)
VC40:
SAVC_03605
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFYFATSCLVLTLVVVSSLSSSANA
N315 MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANA
NCTC8325 MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFYFATSCLVLTLVVVSSLSSSANA
Newman MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFYFATSCLVLTLVVVSSLSSSANA
USA300_FPR3757 MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFYFATSCLVLTLVVVSSLSSSANA
*************************************:**********************
COL SQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDT
N315 SQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDT
NCTC8325 SQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDT
Newman SQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDT
USA300_FPR3757 SQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDT
************************************************************
COL PETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNE
N315 PETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNE
NCTC8325 PETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNE
Newman PETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNE
USA300_FPR3757 PETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNE
****************************:*******************************
COL ALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
N315 ALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
NCTC8325 ALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
Newman ALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
USA300_FPR3757 ALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
************************************************