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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002840000
- symbol?: metQ
- synonym:
- description?: methionine ABC transporter substrate-binding protein
- methionine ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- ABC transporter substrate-binding lipoprotein, putative
- MetQ/NlpA family ABC transporter substrate-binding protein
- ABC superfamily ATP binding cassette transporter, binding protein
- ABC transporter, substrate-binding protein
- ABC transporter ATP-binding protein
- methionine ABC superfamily ATP binding cassette transporter, binding protein
- methionine-binding lipoprotein metQ
- NLPA lipofamily protein
- NLPA lipoprotein
- putative lipoprotein
- substrate-binding ABC transporter protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3291466..3292287
- synteny block?: BlockID0020240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0794
08BA02176:
C248_0908
11819-97:
MS7_0866 (metQ)
6850:
RSAU_000789
71193:
ST398NM01_0894
ECT-R 2:
ECTR2_766
ED133:
SAOV_0856
ED98:
SAAV_0786
HO 5096 0412:
SAEMRSA15_07420
JH1:
SaurJH1_0856
JH9:
SaurJH9_0840
JKD6008:
SAA6008_00837
JKD6159:
SAA6159_00770
LGA251:
SARLGA251_07450
M013:
M013TW_0805
MRSA252:
SAR0872
MSHR1132:
SAMSHR1132_07630
MSSA476:
SAS0781
Mu3:
SAHV_0835
Mu50:
SAV0839
MW2:
MW0792
RF122:
SAB0770
ST398:
SAPIG0894
T0131:
SAT0131_00914
TCH60:
HMPREF0772_12364 (metQ)
TW20:
SATW20_08880
USA300_TCH1516:
USA300HOU_0849
VC40:
SAVC_03730
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYEL
N315 MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYDL
NCTC8325 MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYEL
Newman MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYEL
USA300_FPR3757 MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYEL
**********************************************************:*
COL DIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKY
N315 DIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKY
NCTC8325 DIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKY
Newman DIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKY
USA300_FPR3757 DIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKY
************************************************************
COL KSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFN
N315 KSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFN
NCTC8325 KSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFN
Newman KSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFN
USA300_FPR3757 KSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFN
************************************************************
COL NKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQ
N315 NKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQ
NCTC8325 NKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQ
Newman NKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQ
USA300_FPR3757 NKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQ
************************************************************
COL DDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
N315 DDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
NCTC8325 DDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
Newman DDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
USA300_FPR3757 DDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
*********************************