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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003237000
- symbol?: —
- synonym:
- description?: ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- Fe3 -citrate ABC transporter, substrate-binding lipoprotein, putative
- iron compound ABC transporter iron compound-binding protein
- putative ferrichrome ABC transporter
- periplasmic binding protein
- transport system extracellular bindinglipoprotein
- ferrichrome ABC transporter
- ferrichrome ABC transporter subunit
- Heme ABC type transporter HtsABC, heme-binding protein
- iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein
- iron (Fe3+) ABC transporter binding protein
- iron(III) dicitrate-binding protein
- iron compound ABC transporter, iron compound-binding protein
- iron transport protein
- periplasmic binding family protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3616952..3617929
- synteny block?: BlockID0023210
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0992
08BA02176:
C248_1062
11819-97:
MS7_0995
6850:
RSAU_000927
71193:
ST398NM01_1035
ECT-R 2:
ECTR2_893
ED133:
SAOV_0983
ED98:
SAAV_1001
HO 5096 0412:
SAEMRSA15_08690
JH1:
SaurJH1_1119
JH9:
SaurJH9_1097
JKD6008:
SAA6008_00992
JKD6159:
SAA6159_00894
LGA251:
SARLGA251_09520
M013:
M013TW_0967
MRSA252:
SAR1011
MSHR1132:
—
MSSA476:
SAS0973
Mu3:
SAHV_1031
Mu50:
SAV1038
MW2:
MW0921
RF122:
SAB0905
ST398:
SAPIG1035
T0131:
SAT0131_01072
TCH60:
HMPREF0772_12197
TW20:
SATW20_10340
USA300_TCH1516:
USA300HOU_0985
VC40:
SAVC_04355
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNRNIVKLVVFMLILVVAVAGCGQKDTEEKTEMTTIKDELGTEKIKKNPKRVVVLEYSFA
N315 MNRNIVKLVVFMLILVVAVAGCGQKDTEEKTEMTTIKDELGTEKIKKNPKRVVVLEYSFA
NCTC8325 --------------------------------MTTIKDELGTEKIKKNPKRVVVLEYSFA
Newman MNRNIVKLVVFMLILVVAVAGCGQKDTEEKTEMTTIKDELGTEKIKKNPKRVVVLEYSFA
USA300_FPR3757 --------------------------------MTTIKDELGTEKIKKNPKRVVVLEYSFA
****************************
COL DYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQPNMEVISKLKPDLIIADVS
N315 DYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQPNMEVISKLKPDLIIADVS
NCTC8325 DYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQPNMEVISKLKPDLIIADVS
Newman DYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQPNMEVISKLKPDLIIADVS
USA300_FPR3757 DYLAALDMKPVGIADDGSTKNITKSVRDKIGAYESVGSRPQPNMEVISKLKPDLIIADVS
************************************************************
COL RHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVGKEKEGEKRLEKHDKILAEIR
N315 RHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVGKEKEGEKRLEKHDKILAEIR
NCTC8325 RHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVGKEKEGEKRLEKHDKILAEIR
Newman RHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVGKEKEGEKRLEKHDKILAEIR
USA300_FPR3757 RHKKIKSELSKIAPTIMLVSGTGDYNANIEAFKTVAKAVGKEKEGEKRLEKHDKILAEIR
************************************************************
COL KKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMGIQPEVTKDKTTHVGERKGGPYI
N315 KKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMGIQPEVTKDKTTHVGERKGGPYI
NCTC8325 KKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMGIQPEVTKDKTTHVGERKGGPYI
Newman KKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMGIQPEVTKDKTTHVGERKGGPYI
USA300_FPR3757 KKIEQSTLKSAFAFGISRAGMFINNEDTFMGQFLIKMGIQPEVTKDKTTHVGERKGGPYI
************************************************************
COL YLNNEELANINPKVMILATDGKTDKNRTKFIDPAVWKSLKAVKDNKVYDVDRNKWLKSRG
N315 YLNNEELANINPKVMILATDGKTDKNRTKFIDPAVWKSLKAVKDNKVYDVDRNKWLKSRG
NCTC8325 YLNNEELANINPKVMILATDGKTDKNRTKFIDPAVWKSLKAVKDNKVYDVDRNKWLKSRG
Newman YLNNEELANINPKVMILATDGKTDKNRTKFIDPAVWKSLKAVKDNKVYDVDRNKWLKSRG
USA300_FPR3757 YLNNEELANINPKVMILATDGKTDKNRTKFIDPAVWKSLKAVKDNKVYDVDRNKWLKSRG
************************************************************
COL IIASESMAEDLEKIAEKAK
N315 IIASESMAEDLEKIAEKAK
NCTC8325 IIASESMAEDLEKIAEKAK
Newman IIASESMAEDLEKIAEKAK
USA300_FPR3757 IIASESMAEDLEKIAEKAK
*******************