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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003250000
- symbol?: sspB
- synonym:
- description?: staphopain B
- staphopain B
- cysteine protease
- cysteine protease precursor
- cysteine protease precursor SspB
- cysteine protease staphopain B
- cysteine protease Staphopain B precursor, putative
- Cysteine protease SspB
- C47 family staphopain B
- glycoside hydrolase family protein
- staphopain
- staphopain B (Staphylopain B) (Staphylococcalcysteine proteinase B)
- Staphopain B precursor
- staphopain peptidase C47 family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3626087..3627226
- synteny block?: BlockID0023340
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1002 (sspB)
08BA02176:
C248_1072 (sspB)
11819-97:
MS7_1005 (sspB)
6850:
RSAU_000935 (sspB)
71193:
ST398NM01_1045
ECT-R 2:
ECTR2_903
ED133:
SAOV_0993c
ED98:
SAAV_1011 (sspB1)
HO 5096 0412:
SAEMRSA15_08790 (sspB)
JH1:
SaurJH1_1129
JH9:
SaurJH9_1106
JKD6008:
SAA6008_01002 (sspB)
JKD6159:
SAA6159_00904 (sspB)
LGA251:
SARLGA251_09620 (sspB)
M013:
M013TW_0977
MRSA252:
SAR1021 (sspB)
MSHR1132:
SAMSHR1132_08960
MSSA476:
SAS0983
Mu3:
SAHV_1040 (sspB)
Mu50:
SAV1047 (sspB)
MW2:
MW0931 (sspB)
RF122:
SAB0914c (sspB)
ST398:
SAPIG1045
T0131:
SAT0131_01082
TCH60:
HMPREF0772_12187 (sspB2)
TW20:
SATW20_10440 (sspB)
USA300_TCH1516:
USA300HOU_0995 (sspB)
VC40:
SAVC_04405
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLA
N315 MNSSYKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLA
NCTC8325 MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLA
Newman MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLA
USA300_FPR3757 MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLA
**** *******************************************************
COL QQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPK
N315 QQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPK
NCTC8325 QQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPK
Newman QQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPK
USA300_FPR3757 QQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPK
************************************************************
COL NKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATP
N315 NKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATP
NCTC8325 NKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATP
Newman NKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATP
USA300_FPR3757 NKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATP
************************************************************
COL LPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDN
N315 LPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDN
NCTC8325 LPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDN
Newman LPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDN
USA300_FPR3757 LPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDN
************************************************************
COL SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDI
N315 SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCSTFPNQMIEYGKSQGRDI
NCTC8325 SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDI
Newman SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDI
USA300_FPR3757 SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDI
******************************************:*****************
COL HYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWN
N315 HYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWN
NCTC8325 HYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWN
Newman HYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWN
USA300_FPR3757 HYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWN
************************************************************
COL PWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
N315 PWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
NCTC8325 PWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
Newman PWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
USA300_FPR3757 PWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
*********************************