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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003263000
- symbol?: —
- synonym:
- description?: DUF2538 family protein
- DUF2538 family protein
- putative DUF2538-containing protein
- LytR family transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3639301..3639771
- synteny block?: BlockID0023470
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1009
08BA02176:
C248_1080
11819-97:
MS7_1012
6850:
RSAU_000942
71193:
ST398NM01_1052
ECT-R 2:
ECTR2_910
ED133:
SAOV_1001c
ED98:
SAAV_1019
HO 5096 0412:
SAEMRSA15_08860
JH1:
SaurJH1_1137
JH9:
SaurJH9_1114
JKD6008:
SAA6008_01010
JKD6159:
SAA6159_00911
LGA251:
SARLGA251_09690
M013:
M013TW_0986
MRSA252:
SAR1028
MSHR1132:
SAMSHR1132_09030
MSSA476:
SAS0990
Mu3:
SAHV_1047
Mu50:
SAV1055
MW2:
MW0938
RF122:
SAB0921c
ST398:
SAPIG1052
T0131:
SAT0131_01089
TCH60:
HMPREF0772_12179
TW20:
SATW20_10510
USA300_TCH1516:
USA300HOU_0999
VC40:
SAVC_04440
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDN
N315 MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDN
NCTC8325 MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDN
Newman MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDN
USA300_FPR3757 MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDN
************************************************************
COL PIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTD
N315 PIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTD
NCTC8325 PIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTD
Newman PIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTD
USA300_FPR3757 PIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTD
************************************************************
COL VNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
N315 VNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
NCTC8325 VNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
Newman VNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
USA300_FPR3757 VNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL
************************************