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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003289000
- symbol?: thiX
- synonym:
- description?: energy-coupling factor transporter transmembrane protein EcfT
- energy-coupling factor transporter transmembrane protein EcfT
- cobalt transport family protein
- CbiQ-like cobalt transporter protein, putative
- cobalt transport protein
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter ATP-binding protein
- hydroxymethylpyrimidine transport system permease protein
- membrane transporter
- membrane transport protein
- putative cobalt transport protein
- transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter
- Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3664040..3664846
- synteny block?: BlockID0023730
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1031
08BA02176:
C248_1101
11819-97:
MS7_1033
6850:
RSAU_000962
71193:
ST398NM01_1073
ECT-R 2:
ECTR2_931
ED133:
SAOV_1020c
ED98:
SAAV_1040
HO 5096 0412:
SAEMRSA15_09060
JH1:
SaurJH1_1157
JH9:
SaurJH9_1135
JKD6008:
SAA6008_01031 (ykoC)
JKD6159:
SAA6159_00931 (ykoC)
LGA251:
SARLGA251_09890 (ykoC)
M013:
M013TW_1007
MRSA252:
SAR1049
MSHR1132:
SAMSHR1132_09230
MSSA476:
SAS1011
Mu3:
SAHV_1067
Mu50:
SAV1075
MW2:
MW0958
RF122:
SAB0942c
ST398:
SAPIG1073
T0131:
SAT0131_01112
TCH60:
HMPREF0772_12158
TW20:
SATW20_10710 (ykoC)
USA300_TCH1516:
USA300HOU_1019
VC40:
SAVC_04540
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFN
N315 -----MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFN
NCTC8325 -----MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFN
Newman MMVIRMYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFN
USA300_FPR3757 -----MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFN
*******************************************************
COL GTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIA
N315 GTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIA
NCTC8325 GTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIA
Newman GTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIA
USA300_FPR3757 GTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIA
************************************************************
COL ISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRY
N315 ISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRY
NCTC8325 ISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRY
Newman ISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRY
USA300_FPR3757 ISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRY
************************************************************
COL QMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDII
N315 QMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDII
NCTC8325 QMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDII
Newman QMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDII
USA300_FPR3757 QMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDII
************************************************************
COL FIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
N315 FIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
NCTC8325 FIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
Newman FIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
USA300_FPR3757 FIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
*********************************