PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003323000
• symbol^?: potA
• synonym:
• description^?: spermidine/putrescine import ATP-binding protein PotA

  descriptions from strain specific annotations:

  • spermidine/putrescine import ATP-binding protein PotA
  • spermidine/putrescine ABC transporter ATP-binding protein
  • ABC transporter
  • ABC transporter ATP-binding protein
  • spermidine/putrescine ABC transporter, ATP-binding protein PotA
  • ABC transporter family protein
  • PotA protein
  • putative ABC transport ATP-binding protein
  • putrescine/spermidine ABC transporter ATPase
  • putrescine transport ATP-binding protein PotA
  • spermidine/putrescine ABC superfamily ATP binding cassette transporter, ABC protein
  • spermidine/putrescine ABC transporter
  • spermidine/putrescine ABC transporter ATP-binding subunit
  • spermidine/putrescine ATP-binding ABC transporter protein
  • spermidine/putrescine import ATP-binding protein
  • Spermidine Putrescine transport ATP-binding protein potA
• strand^?: +
• coordinates^?: 3690506..3691600
• synteny block^?: BlockID0024070
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1108
N315:
SA0950 (potA)
NCTC8325:
SAOUHSC_01046
Newman:
NWMN_0965 (potA)
USA300_FPR3757:
SAUSA300_0999 (potA)
04-02981:
SA2981_1056 (potA)
08BA02176:
C248_1126
11819-97:
MS7_1056 (potA)
6850:
RSAU_000984 (potA)
71193:
ST398NM01_1096
ECT-R 2:
ECTR2_954
ED133:
SAOV_1043
ED98:
SAAV_1064
HO 5096 0412:
SAEMRSA15_09290
JH1:
SaurJH1_1181
JH9:
SaurJH9_1159
JKD6008:
SAA6008_01054 (potA)
JKD6159:
SAA6159_00955 (potA)
LGA251:
SARLGA251_10120
M013:
M013TW_1031
MRSA252:
SAR1073
MSHR1132:
SAMSHR1132_09460
MSSA476:
SAS1034
Mu3:
SAHV_1091 (potA)
Mu50:
SAV1099 (potA)
MW2:
MW0982 (potA)
RF122:
SAB0965
ST398:
SAPIG1096
T0131:
SAT0131_01137
TCH60:
HMPREF0772_12133 (potA)
TW20:
SATW20_10940
USA300_TCH1516:
USA300HOU_1042 (potA)
VC40:
SAVC_04655

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGE
  N315            MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGE
  NCTC8325        MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGE
  Newman          MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGE
  USA300_FPR3757  MEPLLSLKSVSKSYDDLNILDDIDIDIESGYFYTLLGPSGCGKTTILKLIAGFEYPDSGE
                  ************************************************************
  
  COL             VIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALK
  N315            VIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALK
  NCTC8325        VIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALK
  Newman          VIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALK
  USA300_FPR3757  VIYQNKPIGNLPPNKRKVNTVFQDYALFPHLNVYDNIAFGLKLKKLSKTEIDQKVTEALK
                  ************************************************************
  
  COL             LVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELREL
  N315            LVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELREL
  NCTC8325        LVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELREL
  Newman          LVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELREL
  USA300_FPR3757  LVKLSGYEKRNINEMSGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELREL
                  ************************************************************
  
  COL             QSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNI
  N315            QSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNI
  NCTC8325        QSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNI
  Newman          QSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNI
  USA300_FPR3757  QSRLGITFIFVTHDQEEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVADFIGESNI
                  ************************************************************
  
  COL             VEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFR
  N315            VEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFR
  NCTC8325        VEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFR
  Newman          VEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFR
  USA300_FPR3757  VEGRMVRDYVVNIYGQDFECVDMGIPENKKVEVVIRPEDISLIKAEEGLFKATVDSMLFR
                  ************************************************************
  
  COL             GVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEE
  N315            GVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEE
  NCTC8325        GVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEE
  Newman          GVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEE
  USA300_FPR3757  GVHYEICCIDNKGYEWVIQTTKKAEVGSEVGLYFDPEAIHIMVPGETEEEFDKRIESYEE
                  ************************************************************
  
  COL             VDNA
  N315            VDNA
  NCTC8325        VDNA
  Newman          VDNA
  USA300_FPR3757  VDNA
                  ****