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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003327000
- symbol?: —
- synonym:
- description?: DUF4064 domain-containing protein
- DUF4064 domain-containing protein
- membrane protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3694354..3695373
- synteny block?: BlockID0024110
- occurrence?: in 100% of 33 strains
suggested symbol of auxB and description of "lipoteichoic acid stability auxiliary factor B" per PMID 33503451
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1060
08BA02176:
C248_1130
11819-97:
MS7_1060
6850:
RSAU_000988
71193:
ST398NM01_1100
ECT-R 2:
ECTR2_958
ED133:
SAOV_1047
ED98:
SAAV_1068
HO 5096 0412:
SAEMRSA15_09330
JH1:
SaurJH1_1185
JH9:
SaurJH9_1163
JKD6008:
SAA6008_01058
JKD6159:
SAA6159_00959
LGA251:
SARLGA251_10160
M013:
M013TW_1035
MRSA252:
SAR1077
MSHR1132:
SAMSHR1132_09500
MSSA476:
SAS1038
Mu3:
SAHV_1095
Mu50:
SAV1103
MW2:
MW0986
RF122:
SAB0969
ST398:
SAPIG1100
T0131:
SAT0131_01142
TCH60:
HMPREF0772_12129
TW20:
SATW20_10980
USA300_TCH1516:
USA300HOU_1044
VC40:
SAVC_04675
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNN
N315 MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNN
NCTC8325 MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNN
Newman MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNN
USA300_FPR3757 MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNN
************************************************************
COL AFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISA
N315 AFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISA
NCTC8325 AFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISA
Newman AFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISA
USA300_FPR3757 AFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISA
************************************************************
COL IVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQ
N315 IVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQ
NCTC8325 IVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQ
Newman IVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQ
USA300_FPR3757 IVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQ
************************************************************
COL PKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQA
N315 PKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQA
NCTC8325 PKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQA
Newman PKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQA
USA300_FPR3757 PKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQA
************************************************************
COL KYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKN
N315 KYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKN
NCTC8325 KYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKN
Newman KYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKN
USA300_FPR3757 KYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKN
************************************************************
COL QPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE
N315 QPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE
NCTC8325 QPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE
Newman QPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE
USA300_FPR3757 QPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE
***************************************