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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003344000
- symbol?: ctaM
- synonym:
- description?: membrane protein
- membrane protein
- DUF420 domain-containing protein
- Putative Heme biosynthesis related protein
- membrane spanning protein
- Protein of hypothetical function
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3713183..3713653
- synteny block?: BlockID0024280
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1074
08BA02176:
C248_1144
11819-97:
MS7_1074
6850:
RSAU_001002
71193:
ST398NM01_1114
ECT-R 2:
ECTR2_972
ED133:
SAOV_1059
ED98:
SAAV_1083
HO 5096 0412:
SAEMRSA15_09470
JH1:
SaurJH1_1199
JH9:
SaurJH9_1177
JKD6008:
SAA6008_01072
JKD6159:
SAA6159_00972
LGA251:
SARLGA251_10300
M013:
M013TW_1049
MRSA252:
SAR1091
MSHR1132:
SAMSHR1132_09640
MSSA476:
SAS1052
Mu3:
SAHV_1109
Mu50:
SAV1117
MW2:
MW1000
RF122:
SAB0982
ST398:
SAPIG1114
T0131:
SAT0131_01156 (lacR)
TCH60:
HMPREF0772_12115
TW20:
SATW20_11120
USA300_TCH1516:
USA300HOU_1055
VC40:
SAVC_04750
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAAVFALTFFLIYASRTIF
N315 MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAAVFALTFFLIYASRTIF
NCTC8325 MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAAVFALTFFLIYASRTIF
Newman MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAAVFALTFFLIYASRTIF
USA300_FPR3757 MGVPILPTISTTCIVISAILIAIGWRLIWKREINKHKNVMLAAAVFALTFFLIYASRTIF
************************************************************
COL IGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAFKDKYNVHRKFGPFASVIW
N315 IGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAFKDKYNVHRKFGPFASVIW
NCTC8325 IGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAFKDKYNVHRKFGPFASVIW
Newman IGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAFKDKYNVHRKFGPFASVIW
USA300_FPR3757 IGNTAFGGPASIKKYYTIFLFFHINLATIGGILGLVQIITAFKDKYNVHRKFGPFASVIW
************************************************************
COL FCTAITGVAVYLLLYVLYPGGETTSLIKATFGH
N315 FCTAITGVAVYLLLYVLYPGGETTSLIKATFGH
NCTC8325 FCTAITGVAVYLLLYVLYPGGETTSLIKATFGH
Newman FCTAITGVAVYLLLYVLYPGGETTSLIKATFGH
USA300_FPR3757 FCTAITGVAVYLLLYVLYPGGETTSLIKATFGH
*********************************