Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003362000
- symbol?: isdD
- synonym:
- description?: heme-iron transport associated protein IsdD
- heme-iron transport associated protein IsdD
- Heme transporter IsdDEF, membrane component IsdD
- heme ABC transporter, membrane component IsdD
- iron complex transport system permease
- iron-regulated protein
- Iron-transporting membrane protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3727959..3729038
- synteny block?: BlockID0024450
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1088 (isdD)
08BA02176:
C248_1158 (isdD)
11819-97:
MS7_1088 (isdD)
6850:
RSAU_001016 (isdD)
71193:
ST398NM01_1128
ECT-R 2:
ECTR2_986
ED133:
SAOV_1128 (isdD)
ED98:
SAAV_1098 (isdD)
HO 5096 0412:
SAEMRSA15_09610 (isdD)
JH1:
SaurJH1_1213
JH9:
SaurJH9_1191
JKD6008:
SAA6008_01086 (isdD)
JKD6159:
SAA6159_00986 (isdD)
LGA251:
SARLGA251_10440 (isdD)
M013:
M013TW_1065
MRSA252:
SAR1105 (isdD)
MSHR1132:
SAMSHR1132_09780
MSSA476:
SAS1066
Mu3:
SAHV_1123
Mu50:
SAV1132
MW2:
MW1014 (isdD)
RF122:
SAB0996 (isdD)
ST398:
SAPIG1128
T0131:
SAT0131_01171
TCH60:
HMPREF0772_12101 (isdD)
TW20:
SATW20_11260 (isdD)
USA300_TCH1516:
USA300HOU_1066
VC40:
SAVC_04820
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDE
N315 MRNVKQIATKSIIAIISLCILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDE
NCTC8325 MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDE
Newman MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDE
USA300_FPR3757 MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDE
****************** *****************************************
COL KIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQN
N315 KIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQN
NCTC8325 KIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQN
Newman KIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQN
USA300_FPR3757 KIKENKALELLIFNQENKNVTEEQQLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQN
************************************************************
COL DKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQ
N315 DKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQ
NCTC8325 DKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQ
Newman DKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQ
USA300_FPR3757 DKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQ
************************************************************
COL HDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQ
N315 HDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQ
NCTC8325 HDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQ
Newman HDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQ
USA300_FPR3757 HDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQ
************************************************************
COL QDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALP
N315 QDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALP
NCTC8325 QDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALP
Newman QDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALP
USA300_FPR3757 QDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALP
************************************************************
COL AFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFAAGIVLATILLISAHLYSRKRGNQV
N315 AFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFAAGIVLATILLISAHLYSRKRGNQV
NCTC8325 AFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFAAGIVLATILLISAHLYSRKRGNQV
Newman AFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFAAGIVLATILLISAHLYSRKRGNQV
USA300_FPR3757 AFNRDDDSKNSSQLSSDIKELDEPNHKKQYMLFAAGIVLATILLISAHLYSRKRGNQV
**********************************************************