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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003372000
- symbol?: —
- synonym:
- description?: RNA methyltransferase
- RNA methyltransferase
- SpoU rRNA methylase family protein
- 23S rRNA methyltransferase
- RNA 2'-O ribose methyltransferase substrate binding family protein
- rRNA methylase
- TrmH family RNA methyltransferase
- TrmH family rRNA methyltransferase
- tRNA/rRNA methyltransferase SpoU
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3734561..3735301
- synteny block?: BlockID0024550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1093 (spoU)
08BA02176:
C248_1164
11819-97:
MS7_1093
6850:
RSAU_001021
71193:
ST398NM01_1133
ECT-R 2:
ECTR2_991
ED133:
SAOV_1133
ED98:
SAAV_1103
HO 5096 0412:
SAEMRSA15_09670
JH1:
SaurJH1_1218
JH9:
SaurJH9_1196
JKD6008:
SAA6008_01091 (spoU)
JKD6159:
SAA6159_00991 (spoU/trmH)
LGA251:
SARLGA251_10490
M013:
M013TW_1070
MRSA252:
SAR1110
MSHR1132:
SAMSHR1132_09830
MSSA476:
SAS1071
Mu3:
SAHV_1128
Mu50:
SAV1137
MW2:
MW1020
RF122:
SAB1001
ST398:
SAPIG1133
T0131:
SAT0131_01178
TCH60:
HMPREF0772_12096
TW20:
SATW20_11310
USA300_TCH1516:
USA300HOU_1072 (spoU/trmH)
VC40:
SAVC_04850
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLD
N315 MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLD
NCTC8325 MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLD
Newman MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLD
USA300_FPR3757 MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLD
************************************************************
COL QQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLG
N315 QQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLG
NCTC8325 QQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLG
Newman QQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLG
USA300_FPR3757 QQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLG
************************************************************
COL TLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQDLDTFITQFNGPVYGT
N315 TLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQDLDTFITQFNGPVYGT
NCTC8325 TLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQDLDTFITQFNGPVYGT
Newman TLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQDLDTFITQFNGPVYGT
USA300_FPR3757 TLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMTQDLDTFITQFNGPVYGT
************************************************************
COL ALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSIL
N315 ALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSIL
NCTC8325 ALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSIL
Newman ALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSIL
USA300_FPR3757 ALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSIL
************************************************************
COL LYHLKG
N315 LYHLKG
NCTC8325 LYHLKG
Newman LYHLKG
USA300_FPR3757 LYHLKG
******