PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003493000
• symbol^?: coaBC
• synonym:
• description^?: phosphopantothenoylcysteine decarboxylase

  descriptions from strain specific annotations:

  • phosphopantothenoylcysteine decarboxylase
  • bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
  • phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
  • bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
  • pantothenate metabolism flavoprotein
  • coenzyme A biosynthesis bifunctional protein CoaBC
  • Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase
  • putative flavoprotein
• strand^?: +
• coordinates^?: 3832169..3833374
• synteny block^?: BlockID0025720
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1223 (coaBC)
N315:
SA1054
NCTC8325:
SAOUHSC_01178
Newman:
NWMN_1121 (coaBC)
USA300_FPR3757:
SAUSA300_1104 (coaBC)
04-02981:
SA2981_1169
08BA02176:
C248_1241
11819-97:
MS7_1169 (coaBC)
6850:
RSAU_001093 (coaBC)
71193:
ST398NM01_1209
ECT-R 2:
ECTR2_1067 (coaBC)
ED133:
SAOV_1214
ED98:
SAAV_1183 (coaBC)
HO 5096 0412:
SAEMRSA15_10440
JH1:
SaurJH1_1295
JH9:
SaurJH9_1270
JKD6008:
SAA6008_01166 (coaBC)
JKD6159:
SAA6159_01064 (coaBC)
LGA251:
SARLGA251_11220
M013:
M013TW_1149
MRSA252:
SAR1187
MSHR1132:
SAMSHR1132_10520
MSSA476:
SAS1145
Mu3:
SAHV_1201
Mu50:
SAV1211
MW2:
MW1094
RF122:
SAB1075
ST398:
SAPIG1209 (coaBC)
T0131:
SAT0131_01260 (moeA)
TCH60:
HMPREF0772_12021 (coaBC)
TW20:
SATW20_12050
USA300_TCH1516:
USA300HOU_1149
VC40:
SAVC_05220

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNMKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYT
  N315            --MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYT
  NCTC8325        --MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYT
  Newman          --MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYT
  USA300_FPR3757  --MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYT
                    **********************************************************
  
  COL             DTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAP
  N315            DTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAP
  NCTC8325        DTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAP
  Newman          DTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAP
  USA300_FPR3757  DTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAP
                  ************************************************************
  
  COL             AMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQN
  N315            AMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQN
  NCTC8325        AMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQN
  Newman          AMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQN
  USA300_FPR3757  AMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQN
                  ************************************************************
  
  COL             SNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGP
  N315            SNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGP
  NCTC8325        SNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGP
  Newman          SNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGP
  USA300_FPR3757  SNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGP
                  ************************************************************
  
  COL             TTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPIDVLEHKMKKQDGDL
  N315            TTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDL
  NCTC8325        TTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDL
  Newman          TTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDL
  USA300_FPR3757  TTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDL
                  *********************************************:**************
  
  COL             SVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIG
  N315            SVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIG
  NCTC8325        SVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIG
  Newman          SVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIG
  USA300_FPR3757  SVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIG
                  ************************************************************
  
  COL             FSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ
  N315            FSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ
  NCTC8325        FSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ
  Newman          FSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ
  USA300_FPR3757  FSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ
                  *****************************************