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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003505000
- symbol?: cfxE
- synonym:
- description?: ribulose-phosphate 3-epimerase
- ribulose-phosphate 3-epimerase
- putative ribulose-phosphate 3-epimerase
- Ribulose-5-phosphate 3-epimerase
- ribulose-5-phosphate 3-epimerase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3845857..3846501
- synteny block?: BlockID0025840
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1180 (cfxE)
08BA02176:
C248_1252
11819-97:
MS7_1180 (rpe)
6850:
RSAU_001104 (rpe)
71193:
ST398NM01_1221
ECT-R 2:
ECTR2_1078 (rpe)
ED133:
SAOV_1225
ED98:
SAAV_1194 (rpe)
HO 5096 0412:
SAEMRSA15_10550
JH1:
SaurJH1_1306
JH9:
SaurJH9_1281
JKD6008:
SAA6008_01177 (rpe)
JKD6159:
SAA6159_01075 (rpe)
LGA251:
SARLGA251_11330
M013:
M013TW_1160
MRSA252:
SAR1198
MSHR1132:
SAMSHR1132_10630
MSSA476:
SAS1156
Mu3:
SAHV_1212 (cfxE)
Mu50:
SAV1222 (cfxE)
MW2:
MW1105 (cfxE)
RF122:
SAB1086
ST398:
SAPIG1221 (rpe)
T0131:
SAT0131_01271
TCH60:
HMPREF0772_12010 (rpe)
TW20:
SATW20_12160
USA300_TCH1516:
USA300HOU_1159 (cfxE)
VC40:
SAVC_05275
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
N315 MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
NCTC8325 MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
Newman MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
USA300_FPR3757 MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
************************************************************
COL PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
N315 PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
NCTC8325 PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
Newman PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
USA300_FPR3757 PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
************************************************************
COL SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
N315 SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
NCTC8325 SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
Newman SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
USA300_FPR3757 SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
************************************************************
COL TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
N315 TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
NCTC8325 TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
Newman TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
USA300_FPR3757 TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
**********************************