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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003549000
- symbol?: gid
- synonym:
- description?: tRNA (uracil-5-)-methyltransferase Gid
- tRNA (uracil-5-)-methyltransferase Gid
- FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO
- methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
- methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
- tRNA:m(5)U-54 methyltransferase
- glucose inhibited division protein A
- tRNA:m(5)U-54 MTase gid
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3885202..3886509
- synteny block?: BlockID0026260
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1209 (gid)
08BA02176:
C248_1282
11819-97:
MS7_1209 (trmFO)
6850:
RSAU_001133
71193:
ST398NM01_1253
ECT-R 2:
ECTR2_1107 (trmFO)
ED133:
SAOV_1253 (gid)
ED98:
SAAV_1225 (gid)
HO 5096 0412:
SAEMRSA15_10840
JH1:
SaurJH1_1336 (gid)
JH9:
SaurJH9_1311 (gid)
JKD6008:
SAA6008_01206 (gid)
JKD6159:
SAA6159_01106 (gid)
LGA251:
SARLGA251_11620 (trmFO)
M013:
M013TW_1191
MRSA252:
SAR1227 (gid)
MSHR1132:
SAMSHR1132_10940
MSSA476:
SAS1185 (gid)
Mu3:
SAHV_1241 (gid)
Mu50:
SAV1251 (gid)
MW2:
MW1134 (gid)
RF122:
SAB1113 (gid)
ST398:
SAPIG1253 (trmFO)
T0131:
SAT0131_01302
TCH60:
HMPREF0772_11979 (trmFO)
TW20:
SATW20_12450 (trmFO)
USA300_TCH1516:
USA300HOU_1182 (gid)
VC40:
SAVC_05420
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNA
N315 MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNA
NCTC8325 MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNA
Newman MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNA
USA300_FPR3757 MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNA
************************************************************
COL LTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINE
N315 LTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINE
NCTC8325 LTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINE
Newman LTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINE
USA300_FPR3757 LTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINE
************************************************************
COL EINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSR
N315 EINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSR
NCTC8325 EINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSR
Newman EINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSR
USA300_FPR3757 EINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSR
************************************************************
COL YDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLL
N315 YDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLL
NCTC8325 YDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLL
Newman YDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLL
USA300_FPR3757 YDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLL
************************************************************
COL FGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLEN
N315 FGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLEN
NCTC8325 FGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLEN
Newman FGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLEN
USA300_FPR3757 FGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLEN
************************************************************
COL VDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLA
N315 VDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLA
NCTC8325 VDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLA
Newman VDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLA
USA300_FPR3757 VDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLA
************************************************************
COL HKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQ
N315 HKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQ
NCTC8325 HKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQ
Newman HKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQ
USA300_FPR3757 HKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQ
************************************************************
COL ANRALDYLENFKKTL
N315 ANRALDYLENFKKTL
NCTC8325 ANRALDYLENFKKTL
Newman ANRALDYLENFKKTL
USA300_FPR3757 ANRALDYLENFKKTL
***************