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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003577000
- symbol?: spoIIIE
- synonym:
- description?: DNA translocase FtsK
- DNA translocase FtsK
- DNA translocase FtsK/SpoIIIE family protein
- FtsK/SpoIIIE family protein
- cell division protein FtsK
- DNA translocase ftsK (DNA translocase SpoIIIE)
- cell division protein FtsK/SpoIIIE
- FtsK/SpoIIIE family DNA translocase
- putative DNA translocase (FtsK/SpoIIIE family protein)
- SpoIII family DNA translocase
- sporulation-related protein SpoIIIE homologue
- sporulation-related protein SpoIIIE-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3916689..3919070
- synteny block?: BlockID0026540
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1234 (ftsK)
08BA02176:
C248_1309
11819-97:
MS7_1234 (ftsK)
6850:
RSAU_001159 (ftsK)
71193:
ST398NM01_1278
ECT-R 2:
ECTR2_1132
ED133:
SAOV_1278
ED98:
SAAV_1251
HO 5096 0412:
SAEMRSA15_11090
JH1:
SaurJH1_1362
JH9:
SaurJH9_1336
JKD6008:
SAA6008_01231 (ftsK)
JKD6159:
SAA6159_01131 (ftsK)
LGA251:
SARLGA251_11870
M013:
M013TW_1216
MRSA252:
SAR1252
MSHR1132:
SAMSHR1132_11190
MSSA476:
SAS1210
Mu3:
SAHV_1266 (spoIIIE)
Mu50:
SAV1276 (spoIIIE)
MW2:
MW1159 (spoIIIE)
RF122:
SAB1138
ST398:
SAPIG1278
T0131:
SAT0131_01331 (fosB)
TCH60:
HMPREF0772_11953
TW20:
SATW20_12700
USA300_TCH1516:
USA300HOU_1208
VC40:
SAVC_05545
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRQLAQAKKKSTAKKKTTSKKRTNSRKKKNDNPIRYVIAILVVVLMVLGVFQLGIIGRLI
N315 ---MAQAKKKSTAKKKTASKKRTNSRKKKNDNPIRYVIAILVVVLMVLGVFQLGIIGRLI
NCTC8325 ---------------------------------------------MVLGVFQLGIIGRLI
Newman ---MAQAKKKSTAKKKTTSKKRTNSRKKKNDNPIRYVIAILVVVLMVLGVFQLGIIGRLI
USA300_FPR3757 ---------------------------------------------MVLGVFQLGIIGRLI
***************
COL DSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNS
N315 DSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNS
NCTC8325 DSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNS
Newman DSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNS
USA300_FPR3757 DSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNS
************************************************************
COL GIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVI
N315 GIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVI
NCTC8325 GIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVI
Newman GIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVI
USA300_FPR3757 GIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVI
************************************************************
COL LLTNHQHREVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKARLKEEQKARQNEQPQI
N315 LLTNHQHRDVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKARLKEEQKARQNEQPQI
NCTC8325 LLTNHQHREVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKARLKEEQKARQNEQPQI
Newman LLTNHQHREVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKARLKEEQKARQNEQPQI
USA300_FPR3757 LLTNHQHREVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKAKLKEEQKARQNEQPQI
********:***********************************:***************
COL KDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFDAENSSNNIVNHHQADQQEQLT
N315 KDVSDFTEVPQERDIPIYGHTENESKSQCQPSRKKRVFDAENSSNNIVN-HQADQQEQLT
NCTC8325 KDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFDAENSSNNIVNHHQADQQEQLT
Newman KDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFDAENSSNNIVNHHQADQQEQLT
USA300_FPR3757 KDVSDFTEVPQERDIPIYGHTENESKSQSQPSRKKRVFDAENSSNNIVNHHQADQQEQLT
****************************.******************** **********
COL EQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDF
N315 EQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDF
NCTC8325 EQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDF
Newman EQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDF
USA300_FPR3757 EQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDF
************************************************************
COL GVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVG
N315 GVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVG
NCTC8325 GVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVG
Newman GVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVG
USA300_FPR3757 GVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVG
************************************************************
COL IEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGK
N315 IEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGK
NCTC8325 IEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGK
Newman IEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGK
USA300_FPR3757 IEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGK
************************************************************
COL SVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIV
N315 SVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIV
NCTC8325 SVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIV
Newman SVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIV
USA300_FPR3757 SVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIV
************************************************************
COL AEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEV
N315 AEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEV
NCTC8325 AEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEV
Newman AEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEV
USA300_FPR3757 AEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEV
************************************************************
COL ENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGG
N315 ENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGG
NCTC8325 ENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGG
Newman ENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGG
USA300_FPR3757 ENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGG
************************************************************
COL AEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDK
N315 AEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDK
NCTC8325 AEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDK
Newman AEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDK
USA300_FPR3757 AEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDK
************************************************************
COL SEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKP
N315 SEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKP
NCTC8325 SEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKP
Newman SEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKP
USA300_FPR3757 SEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKP
************************************************************
COL RQVLIDLNNDEV
N315 RQVLIDLNNDEV
NCTC8325 RQVLIDLNNDEV
Newman RQVLIDLNNDEV
USA300_FPR3757 RQVLIDLNNDEV
************