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Summary[edit | edit source]

  • pan ID?: SAUPAN003697000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 4002125..4002721
  • synteny block?: BlockID0027630
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1281
    08BA02176:
    C248_1360
    11819-97:
    MS7_1285
    6850:
    RSAU_001208
    71193:
    ST398NM01_1328
    ECT-R 2:
    ECTR2_1185
    ED133:
    SAOV_1339
    ED98:
    SAAV_1305
    HO 5096 0412:
    SAEMRSA15_11730
    JH1:
    SaurJH1_1414
    JH9:
    SaurJH9_1387
    JKD6008:
    SAA6008_01291
    JKD6159:
    SAA6159_01193
    LGA251:
    SARLGA251_12350
    M013:
    M013TW_1274
    MRSA252:
    SAR1336
    MSHR1132:
    SAMSHR1132_11710
    MSSA476:
    SAS1266
    Mu3:
    SAHV_1315
    Mu50:
    SAV1326
    MW2:
    MW1213
    RF122:
    SAB1184
    ST398:
    SAPIG1328
    T0131:
    SAT0131_01395
    TCH60:
    HMPREF0772_11882
    TW20:
    SATW20_13280
    USA300_TCH1516:
    USA300HOU_1270
    VC40:
    SAVC_05870

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MRVNEMNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEICVERKRLSDIVK
    N315            MRVNEMNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEICVERKRLSDIVK
    NCTC8325        -----MNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEICVERKRLSDIVK
    Newman          MRVNEMNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEICVERKRLSDIVK
    USA300_FPR3757  -----MNAKEQLVDNLMKTSSQLFKFHGEVAMQLFLNDELKLPSIVEICVERKRLSDIVK
                         *******************************************************

    COL             VIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYDVVNDEWIFRLDPN
    N315            VIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYDVVNDEWIFRLDPN
    NCTC8325        VIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYDVVNDEWIFRLDPN
    Newman          VIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYDVVNDEWIFRLDPN
    USA300_FPR3757  VIPQSYALLYIDKQDQAIAKEDLSLSKIAKVYVQYDDTTIMSIFVYDVVNDEWIFRLDPN
                    ************************************************************

    COL             IRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRVIDALSYYQFFILKFV
    N315            IRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRVIDALSYYQFFILKFV
    NCTC8325        IRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRVIDALSYYQFFILKFV
    Newman          IRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRVIDALSYYQFFILKFV
    USA300_FPR3757  IRIPKSNIYFHSLNWDVDYIKPEIVLMYDLMQHHQYHHYSNYKRVIDALSYYQFFILKFV
                    ************************************************************

    COL             VGEQRIKDAIQRTINN
    N315            VGEQRIKDAIQRTINN
    NCTC8325        VGEQRIKDAIQRTINN
    Newman          VGEQRIKDAIQRTINN
    USA300_FPR3757  VGEQRIKDAIQRTINN
                    ****************