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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003748000
- symbol?: cozEb
- synonym:
- description?: AI-2E family transporter
- AI-2E family transporter
- Membrane protein YubA
- membrane protein
- membrane spanning protein
- putative transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4046977..4048185
- synteny block?: BlockID0028110
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1313 (yrrI)
08BA02176:
C248_1396
11819-97:
MS7_1316
6850:
RSAU_001240
71193:
ST398NM01_1360
ECT-R 2:
ECTR2_1216
ED133:
SAOV_1370
ED98:
SAAV_1339
HO 5096 0412:
SAEMRSA15_12070
JH1:
SaurJH1_1448
JH9:
SaurJH9_1420
JKD6008:
SAA6008_01324
JKD6159:
SAA6159_01224
LGA251:
SARLGA251_12680
M013:
M013TW_1305
MRSA252:
SAR1371
MSHR1132:
SAMSHR1132_12020
MSSA476:
SAS1299
Mu3:
SAHV_1347
Mu50:
SAV1359
MW2:
MW1246
RF122:
SAB1215
ST398:
SAPIG1360
T0131:
SAT0131_01431 (dsbA)
TCH60:
HMPREF0772_11850
TW20:
SATW20_13590
USA300_TCH1516:
USA300HOU_1293
VC40:
SAVC_06040
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVF
N315 MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVF
NCTC8325 MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVF
Newman MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVF
USA300_FPR3757 MNENEKNIRKNFLKFTESRYMKFVGGNDLVFSLIALVLLGIVIFIFEKVSYVFDPFIIVF
************************************************************
COL KTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQ
N315 KTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQ
NCTC8325 KTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQ
Newman KTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQ
USA300_FPR3757 KTIAAPIIVSLILFYLFNPIVNMMERYRIPRVAGISIIYLAVVGVITLIVNLLIPIIGSQ
************************************************************
COL VDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSK
N315 VDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSK
NCTC8325 VDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSK
Newman VDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSK
USA300_FPR3757 VDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFTDGFGSK
************************************************************
COL IATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
N315 IATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
NCTC8325 IATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
Newman IATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
USA300_FPR3757 IATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHDLLEKMSVQVG
************************************************************
COL SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAI
N315 SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAI
NCTC8325 SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAI
Newman SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAI
USA300_FPR3757 SYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIAISPAIVIAAI
************************************************************
COL TSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGI
N315 TSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGI
NCTC8325 TSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGI
Newman TSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGI
USA300_FPR3757 TSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKLLGIVGVILGI
************************************************************
COL PGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKIVE
N315 PGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKIVE
NCTC8325 PGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKIVE
Newman PGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKIVE
USA300_FPR3757 PGYAILKVLVTHLFQLFKRRYNRFYGNDVGEYDIKESNKIVE
******************************************