PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003821000
• symbol^?: xpaC
• synonym:
• description^?: 5-bromo-4-chloroindolyl phosphate hydrolysis protein

  descriptions from strain specific annotations:

  • 5-bromo-4-chloroindolyl phosphate hydrolysis protein
  • 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC, putative
  • 5-bromo-4-chloroindolyl phosphate hydrolase
  • 5-bromo-4-chloroindolyl phosphate hydrolysis family protein
  • 5-bromo-4-chloroindolyl phosphate hydrolysis protein-like protein
  • 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC
  • membrane protein
  • Xpac
• strand^?: +
• coordinates^?: 4109728..4110360
• synteny block^?: BlockID0028780
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL1440
N315:
SA1237
NCTC8325:
SAOUHSC_01407
Newman:
NWMN_1316
USA300_FPR3757:
SAUSA300_1298
04-02981:
SA2981_1359 (xpaC)
08BA02176:
—
11819-97:
MS7_1361
6850:
RSAU_001285 (xpaC)
71193:
ST398NM01_1407
ECT-R 2:
ECTR2_1262
ED133:
SAOV_1415
ED98:
SAAV_1389
HO 5096 0412:
SAEMRSA15_12680
JH1:
SaurJH1_1495
JH9:
SaurJH9_1466
JKD6008:
SAA6008_01369 (xpaC)
JKD6159:
SAA6159_01272 (xpaC)
LGA251:
SARLGA251_13220
M013:
M013TW_1350
MRSA252:
SAR1417
MSHR1132:
SAMSHR1132_12460
MSSA476:
SAS1346
Mu3:
SAHV_1393
Mu50:
SAV1405
MW2:
MW1293
RF122:
SAB1261
ST398:
SAPIG1407
T0131:
SAT0131_01480
TCH60:
HMPREF0772_11804
TW20:
SATW20_14040
USA300_TCH1516:
USA300HOU_1338 (xpaC)
VC40:
SAVC_06270

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRK
  N315            --MRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRK
  NCTC8325        MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRK
  Newman          MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRK
  USA300_FPR3757  MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRK
                    :*********************************************************
  
  COL             YLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVR
  N315            YLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVR
  NCTC8325        YLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVR
  Newman          YLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVR
  USA300_FPR3757  YLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVR
                  ************************************************************
  
  COL             QRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIA
  N315            QRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIA
  NCTC8325        QRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIA
  Newman          QRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIA
  USA300_FPR3757  QRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIA
                  ************************************************************
  
  COL             DLKRLNEDDYERLDIEMELNKLHQKHHQD
  N315            DLKRLNEDDYERLDIEMELNKLHQKHHQD
  NCTC8325        DLKRLNEDDYERLDIEMELNKLHQKHHQD
  Newman          DLKRLNEDDYERLDIEMELNKLHQKHHQD
  USA300_FPR3757  DLKRLNEDDYERLDIEMELNKLHQKHHQD
                  *****************************