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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003871000
- symbol?: rnhA
- synonym:
- description?: ribonuclease H
- ribonuclease H
- cell wall enzyme EbsB
- putative cell wall enzyme EbsB
- putative ribonuclease H
- ribonuclease HI family protein
- cell wall enzyme EbsB, putative
- cell wall enzyme EbsB-like protein
- Ribonuclease HI
- ribonuclease HI-like protein
- RNase H family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4145660..4146061
- synteny block?: BlockID0029270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1388
08BA02176:
C248_1473
11819-97:
MS7_1390
6850:
RSAU_001311
71193:
ST398NM01_1433
ECT-R 2:
ECTR2_1288
ED133:
SAOV_1442
ED98:
SAAV_1416
HO 5096 0412:
SAEMRSA15_12960
JH1:
SaurJH1_1523
JH9:
SaurJH9_1494
JKD6008:
SAA6008_01402
JKD6159:
SAA6159_01299
LGA251:
SARLGA251_13490
M013:
M013TW_1380
MRSA252:
SAR1446
MSHR1132:
SAMSHR1132_12740
MSSA476:
SAS1376
Mu3:
SAHV_1421
Mu50:
SAV1433
MW2:
MW1323
RF122:
SAB1288
ST398:
SAPIG1433
T0131:
SAT0131_01515
TCH60:
HMPREF0772_11773 (rnhA)
TW20:
SATW20_14340
USA300_TCH1516:
USA300HOU_1371
VC40:
SAVC_06425
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKINFDAATKGNPGISTCAIVIKEDEQHYTYTHELGEMDNHTAEWAACIYALEHARELN
N315 MAKINFDAATKGNPGISTCAIVIKEDKQHYTYTHELGEMDNHTAEWAACIYALEHARELN
NCTC8325 MAKINFDAATKGNPGISTCAIVIKEDEQHYTYTHELGEMDNHTAEWAACIYALEHARELN
Newman MAKINFDAATKGNPGISTCAIVIKEDEQHYTYTHELGEMDNHTAEWAACIYALEHARELN
USA300_FPR3757 MAKINFDAATKGNPGISTCAIVIKEDEQHYTYTHELGEMDNHTAEWAACIYALEHARELN
**************************:*********************************
COL VQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFDLLFVKWIPREQNKEANQH
N315 VQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFDLLFVKWIPREQNKEANQH
NCTC8325 VQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFDLLFVKWIPREQNKEANQH
Newman VQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFDLLFVKWIPREQNKEANQH
USA300_FPR3757 VQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKDFDLLFVKWIPREQNKEANQH
************************************************************
COL AQQALYKLIKKNK
N315 AQQALYKLIKKNK
NCTC8325 AQQALYKLIKKNK
Newman AQQALYKLIKKNK
USA300_FPR3757 AQQALYKLIKKNK
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