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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003893000
- symbol?: ald1
- synonym:
- description?: alanine dehydrogenase
- alanine dehydrogenase
- Alanine dehydrogenase 1
- alanine dehydrogenase 2
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4214290..4215408
- synteny block?: BlockID0029390
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1394
08BA02176:
C248_1478 (ald2)
11819-97:
MS7_1395
6850:
—
71193:
ST398NM01_1438
ECT-R 2:
ECTR2_1293 (ald)
ED133:
SAOV_1448 (ald)
ED98:
SAAV_1423 (ald1)
HO 5096 0412:
SAEMRSA15_13010 (ald2)
JH1:
SaurJH1_1528
JH9:
SaurJH9_1499
JKD6008:
SAA6008_01407 (ald1)
JKD6159:
SAA6159_01304 (ald1)
LGA251:
SARLGA251_13540 (ald2)
M013:
M013TW_1386
MRSA252:
SAR1451 (ald2)
MSHR1132:
SAMSHR1132_12800
MSSA476:
SAS1382
Mu3:
SAHV_1427
Mu50:
SAV1439
MW2:
MW1328
RF122:
SAB1304c (ald)
ST398:
SAPIG1438 (ald)
T0131:
SAT0131_01527
TCH60:
HMPREF0772_11767 (ald2)
TW20:
SATW20_14390 (ald2)
USA300_TCH1516:
USA300HOU_1376 (ald1)
VC40:
SAVC_06450
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
N315 MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
NCTC8325 MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
Newman MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
USA300_FPR3757 MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
************************************************************
COL EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
N315 EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
NCTC8325 EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
Newman EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
USA300_FPR3757 EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
************************************************************
COL NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
N315 NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
NCTC8325 NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
Newman NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
USA300_FPR3757 NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
************************************************************
COL TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
N315 TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
NCTC8325 TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
Newman TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
USA300_FPR3757 TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
************************************************************
COL LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
N315 LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
NCTC8325 LISGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
Newman LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
USA300_FPR3757 LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
**.*********************************************************
COL NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
N315 NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
NCTC8325 NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
Newman NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
USA300_FPR3757 NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
************************************************************
COL DLDYKEILNVIE
N315 DLDYKEILNVIE
NCTC8325 DLDYKEILNVIE
Newman DLDYKEILNVIE
USA300_FPR3757 DLDYKEILNVIE
************