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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003897000
- symbol?: —
- synonym:
- description?: PepSY domain-containing protein
- PepSY domain-containing protein
- sulfite reductase [NADPH] flavoprotein alpha-component
- Sulfite reductase flavoprotein alpha-component
- pepSY-associated TM helix family protein
- peptidase
- pseudogene
- putative iron-regulated membrane protein
- putative iron-regulated membrane protein , Iron-uptake factor PiuB
- sulfite reductase [NADPH], flavoprotein, alpha subunit
- sulfite reductase [NADPH] flavoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4220537..4221917
- synteny block?: BlockID0029430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1397 (piuB)
08BA02176:
C248_1481
11819-97:
MS7_1398
6850:
RSAU_001315
71193:
ST398NM01_1441
ECT-R 2:
ECTR2_1296
ED133:
SAOV_1451
ED98:
SAAV_1426
HO 5096 0412:
SAEMRSA15_13040
JH1:
SaurJH1_1531
JH9:
SaurJH9_1502
JKD6008:
SAA6008_01410 (piuB)
JKD6159:
SAA6159_01307 (piuB)
LGA251:
SARLGA251_13570
M013:
M013TW_1389
MRSA252:
SAR1454
MSHR1132:
SAMSHR1132_12830
MSSA476:
SAS1385
Mu3:
SAHV_1430
Mu50:
SAV1442
MW2:
MW1331
RF122:
SAB1307
ST398:
SAPIG1441
T0131:
SAT0131_01530
TCH60:
HMPREF0772_11763
TW20:
SATW20_14420
USA300_TCH1516:
USA300HOU_1379
VC40:
SAVC_06465
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIYKNEFFGDSDVKTHQTL
N315 MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIYKNEFFGDSDVKTHQTL
NCTC8325 MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIYKNEFFGDSDVKTHQTL
Newman MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIYKNEFFGDSDVKTHQTL
USA300_FPR3757 MKNTFNPLQRLHFYAAIFIAPLLITLTISGIGYLFFPEVENNIYKNEFFGDSDVKTHQTL
************************************************************
COL NDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYVFLDHNNQFVADQNAKHTY
N315 NDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYVFLDHNNQFVADQNAKHTY
NCTC8325 NDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYVFLDHNNQFVADQNAKHTY
Newman NDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYVFLDHNNQFVADQNAKHTY
USA300_FPR3757 NDAVHQVEQQYEGFFVSKVSILDEPYNKRITLSDMAGNQRYVFLDHNNQFVADQNAKHTY
************************************************************
COL SNVMRSIHSSLFTENTIINYLVELTACWMIFMILSGTYLLIKKHLISNKSKALRWQKWHA
N315 SNVMRSIHSSLFTENTIINYLVELTACWTIFMILSGTYLLIKKHLISNKSKALRWQKWHA
NCTC8325 SNVMRSIHSSLFTENTIINYLVELTACWMIFMILSGTYLLIKKHLISNKSKALRWQKWHA
Newman SNVMRSIHSSLFTENTIINYLVELTACWMIFMILSGTYLLIKKHLISNKSKALRWQKWHA
USA300_FPR3757 SNVMRSIHSSLFTENTIINYLVELTACWMIFMILSGTYLLIKKHLISNKSKALRWQKWHA
**************************** *******************************
COL MIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDLGQGELAINPPKSDLNELPWATR
N315 MIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDLGQGELAINPPKSDLNELPWATR
NCTC8325 MIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDLGQGELAINPPKSDLNELPWATR
Newman MIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGDLGQGELAINPPKSDLNELPWATR
USA300_FPR3757 MIGVIIAIPVFVLVLTGLPWSGFMGSKIAGMMDTNGALGQGELAINPPKSDLNELPWATR
************************************ ***********************
COL KNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVVEQAQKAGIKKPFSIVYPSDKNGTF
N315 KNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVVVQAQKAGIKKPFSIVYPSDKNGTF
NCTC8325 KNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVVEQAQKAGIKKPFSIVYPSDKNGTF
Newman KNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVVEQAQKAGIKKPFSIVYPSDKNGTF
USA300_FPR3757 KNKQPASSEKGSSGHHGNAAMPQTKLDYQISIDKVVEQAQKAGIKKPFSIVYPSDKNGTF
************************************ ***********************
COL IVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLGTIKYDDYGIIAKWFTWGIPLHEGHLF
N315 IVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLGTIKYDDYGIIAKWFTWGIPLHEGHLF
NCTC8325 IVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLGTIKYDDYGIIAKWFTWGIPLHEGHLF
Newman IVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLGTIKYDDYGIIAKWFTWGIPLHEGHLF
USA300_FPR3757 IVSNTSNSGVTGLDVSPYKEQTLYFDQYSGKKLGTIKYDDYGIIAKWFTWGIPLHEGHLF
************************************************************
COL GILNKIINLFVCIALLVAIGMGFVSWIKRTKNTAVKVTHRVKKPASISLIICLIVLGLLM
N315 GILNKIINLFVCITLLVAIGMGFVSWIKRTKNTAVKVPHRVKKPASISLIICLIVLGLLM
NCTC8325 GILNKIINLFVCIALLVAIGMGFVSWIKRTKNTAVKVPHRVKKPASISLIICLIVLGLLM
Newman GILNKIINLFVCIALLVAIGMGFVSWIKRTKNTAVKVTHRVKKPASISLIICLIVLGLLM
USA300_FPR3757 GILNKIINLFVCIALLVAIGMGFVSWIKRTKNTAIKVPHRVKKPASISLIICLIVLGLLM
*************:********************:**.**********************
COL PLFGLSLILVFIIELILYIKDRRAKQ
N315 PLFGLSLILVFIIELILYIKDRRAKQ
NCTC8325 PLFGLSLILVFIIELILYIKDRRAKQ
Newman PLFGLSLILVFIIELILYIKDRRAKQ
USA300_FPR3757 PLFGLSLILVFIIELILYIKDRRAKQ
**************************