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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003922000
- symbol?: —
- synonym:
- description?: IDEAL domain-containing protein
- IDEAL domain-containing protein
- putative staphylococcal protein
- domain family
- IDEAL domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4242942..4243521
- synteny block?: BlockID0029680
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1418
08BA02176:
C248_1502
11819-97:
MS7_1418
6850:
RSAU_001334
71193:
ST398NM01_1462
ECT-R 2:
ECTR2_1316
ED133:
SAOV_1470
ED98:
SAAV_1449
HO 5096 0412:
SAEMRSA15_13230
JH1:
SaurJH1_1550
JH9:
SaurJH9_1521
JKD6008:
SAA6008_01431
JKD6159:
SAA6159_01327
LGA251:
SARLGA251_13760
M013:
M013TW_1410
MRSA252:
SAR1473
MSHR1132:
SAMSHR1132_13020
MSSA476:
SAS1405
Mu3:
SAHV_1450
Mu50:
SAV1462
MW2:
MW1352
RF122:
SAB1326c
ST398:
SAPIG1462
T0131:
SAT0131_01551
TCH60:
HMPREF0772_11742
TW20:
SATW20_14610
USA300_TCH1516:
USA300HOU_1400
VC40:
SAVC_06565
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSETFNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANIHFVDTKINHHETLEIA
N315 MSETLNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANIHFVDTKINHHETLEIA
NCTC8325 MSETLNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANIHFVDTKINHHETLEIA
Newman MSETFNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANIHFVDTKINHHETLEIA
USA300_FPR3757 MSETFNQIKESFIEYLLFQYRFKSRIAVWVLNYIKVNEAKLANIHFVDTKINHHETLEIA
****:*******************************************************
COL EVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFANVSKREQRLDDLIVAQLT
N315 EVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFANVSKREQRLDDLIVAQLT
NCTC8325 EVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFANVSKREQRLDDLIVAQLT
Newman EVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFANVSKREQRLDDLIVAQLT
USA300_FPR3757 EVGSHASAIQFTKRNIKLMNTNEIFDYIANHNCAFDIQIHFANVSKREQRLDDLIVAQLT
************************************************************
COL ESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMNEKQRFYQLTQILNTLKLVNK
N315 ESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMNEKQRFYQLTQILNTLKLVNK
NCTC8325 ESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMNEKQRFYQLTQILNTLKLVNK
Newman ESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMNEKQRFYQLTQILNTLKLVNK
USA300_FPR3757 ESPSYQTYLHDLNSMAIDRHKHALLIDYLLHNIDLSLQMNEKQRFYQLTQILNTLKLVNK
************************************************************
COL HNQFEDLADDN
N315 HNQFEDLADDD
NCTC8325 HNQFEDLADDN
Newman HNQFEDLADDN
USA300_FPR3757 HNQFEDLADDN
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