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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003948000
- symbol?: —
- synonym:
- description?: hypothetical protein YpbB
- strand?: -
- coordinates?: 4264440..4265399
- synteny block?: BlockID0029940
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1439 (ypbB)
08BA02176:
C248_1523
11819-97:
MS7_1436
6850:
RSAU_001353
71193:
ST398NM01_1482
ECT-R 2:
ECTR2_1334
ED133:
SAOV_1489
ED98:
SAAV_1470
HO 5096 0412:
SAEMRSA15_13420
JH1:
SaurJH1_1570
JH9:
SaurJH9_1539
JKD6008:
SAA6008_01451
JKD6159:
SAA6159_01346
LGA251:
SARLGA251_13950
M013:
M013TW_1430
MRSA252:
SAR1491
MSHR1132:
SAMSHR1132_13210
MSSA476:
SAS1423
Mu3:
SAHV_1471
Mu50:
SAV1483
MW2:
MW1371
RF122:
SAB1345c
ST398:
SAPIG1482
T0131:
SAT0131_01572
TCH60:
HMPREF0772_11723
TW20:
SATW20_14800
USA300_TCH1516:
USA300HOU_1421
VC40:
SAVC_06660
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
N315 MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
NCTC8325 MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
Newman MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
USA300_FPR3757 MQHIIKTALQQTFNYKTNKSIYNILVGKKSHQTFFDACSQQQLSLYHSLPLLKYPSFELF
************************************************************
COL LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
N315 LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
NCTC8325 LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
Newman LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
USA300_FPR3757 LEKINEFNAEMEIMLHPRYTFESMGQTFQAIQLLVQTMSNTKQHVFHFVPISQNNKIQET
************************************************************
COL VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
N315 VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
NCTC8325 VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
Newman VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
USA300_FPR3757 VKIVYNYIKENQLQIDFENELHNLFKAITLKGPCYLHYYLQGYDEPMYTRQQVSLIEKLS
************************************************************
COL QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
N315 QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
NCTC8325 QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
Newman QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
USA300_FPR3757 QQQLFEYEMNNLVTMMFELESGEYTILSKIIMKPTLLNQTYITYTKLLEQFTMEDIAAQQ
************************************************************
COL QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
N315 QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
NCTC8325 QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
Newman QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
USA300_FPR3757 QVKINTIEDHVLEILIKGYMSNYDDYVELEDQLQFLNFYQQHRGERLKFYKEQFDTLSYF
************************************************************
COL QLKVLIVGFERGDLNVA
N315 QLKVLIVGFERGDLNVA
NCTC8325 QLKVLIVGFERGDLNVA
Newman QLKVLIVGFERGDLNVA
USA300_FPR3757 QLKVLIVGFERGDLNVA
*****************