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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004024000
- symbol?: srrB
- synonym:
- description?: two-component sensor histidine kinase
- two-component sensor histidine kinase
- respiratory response protein SrrB
- sensor histidine kinase SrrB
- HAMP domain-containing protein
- respiratory response protein, SrrB
- sensor protein srrB (Staphylococcal respiratory responseprotein B)
- integral membrane sensor signal transduction histidine kinase
- Osmosensitive K+ channel histidine kinase KdpD
- ResE
- respiratory response protein B
- sensor kinase protein
- sensor kinase SrrB
- Sensor protein srrB
- staphylococcal respiratory response protein B
- Staphylococcal respiratory response protein SrrB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4314705..4316399
- synteny block?: BlockID0030610
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1448 (srrB)
08BA02176:
C248_1531 (srrB)
11819-97:
MS7_1508 (srrB)
6850:
RSAU_001359 (srrB)
71193:
ST398NM01_1557
ECT-R 2:
ECTR2_1342
ED133:
SAOV_1493
ED98:
SAAV_1481 (srrB)
HO 5096 0412:
SAEMRSA15_14130 (srrB)
JH1:
SaurJH1_1579
JH9:
SaurJH9_1548
JKD6008:
SAA6008_01461 (srrB)
JKD6159:
SAA6159_01420 (srrB)
LGA251:
SARLGA251_13990 (srrB)
M013:
M013TW_1505
MRSA252:
SAR1567 (srrB)
MSHR1132:
SAMSHR1132_13300
MSSA476:
SAS1431
Mu3:
SAHV_1479 (srrB)
Mu50:
SAV1491 (srrB)
MW2:
MW1445 (srrB)
RF122:
SAB1352c (srrB)
ST398:
SAPIG1557
T0131:
SAT0131_01584
TCH60:
HMPREF0772_11650 (srrB)
TW20:
SATW20_14890 (srrB)
USA300_TCH1516:
USA300HOU_1493 (srrB)
VC40:
SAVC_06705
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRIS
N315 MRLNLMMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRIS
NCTC8325 -----MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRIS
Newman -----MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRIS
USA300_FPR3757 MRLNLMMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRIS
*******************************************************
COL SLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDV
N315 SLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDV
NCTC8325 SLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDV
Newman SLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDV
USA300_FPR3757 SLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDV
************************************************************
COL FDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITI
N315 FDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITI
NCTC8325 FDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITI
Newman FDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITI
USA300_FPR3757 FDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITI
************************************************************
COL ITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQ
N315 ITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQ
NCTC8325 ITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQ
Newman ITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQ
USA300_FPR3757 ITIITAVIFLTITTVFAFFLSSRITKPLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQ
************************************************************
COL AFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDED
N315 AFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDED
NCTC8325 AFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDED
Newman AFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDED
USA300_FPR3757 AFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMANDIMDNIDED
************************************************************
COL AKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHN
N315 AKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHN
NCTC8325 AKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHN
Newman AKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHN
USA300_FPR3757 AKAFLLRQIEDTFKSKQTEMRDLEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHN
************************************************************
COL LDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVN
N315 LDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAVVLDESKRLNRLVN
NCTC8325 LDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVN
Newman LDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVN
USA300_FPR3757 LDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTEPDEIKESLAIVLDESKRLNRLVN
**********************************************:*************
COL ELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR
N315 ELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR
NCTC8325 ELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR
Newman ELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR
USA300_FPR3757 ELLNVARMDAEGLSVNKEVQPIAALLDKMKIKYRQQADDLGLNMTFNYCKKRVWSYDMDR
************************************************************
COL MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD
N315 MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD
NCTC8325 MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD
Newman MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD
USA300_FPR3757 MDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVD
************************************************************
COL AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
N315 AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
NCTC8325 AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
Newman AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
USA300_FPR3757 AARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE
************************************************