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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004035000
- symbol?: —
- synonym:
- description?: SDR family oxidoreductase
- SDR family oxidoreductase
- short chain dehydrogenase/reductase family oxidoreductase
- short chain dehydrogenase/reductase oxidoreductase
- short-chain dehydrogenase protein, putative
- short-chain oxidoreductase family protein
- oxidoreductase, short-chain dehydrogenase/reductase family
- HetN
- oxidoreductase
- putative short chain dehydrogenase
- short-chain dehydrogenase/reductase SDR
- short chain dehydrogenase family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4323575..4324330
- synteny block?: BlockID0030720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1459
08BA02176:
C248_1542
11819-97:
MS7_1519
6850:
RSAU_001369
71193:
ST398NM01_1568
ECT-R 2:
ECTR2_1353
ED133:
SAOV_1504
ED98:
SAAV_1492
HO 5096 0412:
SAEMRSA15_14240
JH1:
SaurJH1_1590
JH9:
SaurJH9_1559
JKD6008:
SAA6008_01471
JKD6159:
SAA6159_01431
LGA251:
SARLGA251_14100
M013:
M013TW_1516
MRSA252:
SAR1578
MSHR1132:
SAMSHR1132_13410
MSSA476:
SAS1442
Mu3:
SAHV_1490
Mu50:
SAV1502
MW2:
MW1456
RF122:
SAB1363c
ST398:
SAPIG1568
T0131:
SAT0131_01595
TCH60:
HMPREF0772_11639
TW20:
SATW20_15000
USA300_TCH1516:
USA300HOU_1503
VC40:
SAVC_06760
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLN
N315 MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLN
NCTC8325 MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLN
Newman MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLN
USA300_FPR3757 MKGQHFIVTGGTSGLGLSIVRKLLENKVHVTLLVRDVDKATRIFEQELGKTINVIPCDLN
************************************************************
COL DLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPY
N315 DLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPY
NCTC8325 DLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPY
Newman DLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPY
USA300_FPR3757 DLKSIQALQFEDNTSFDGFIYSAGLGYFKSISDHSFSEMIETYQLNLISFNVLYTVLRPY
************************************************************
COL LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPF
N315 LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPF
NCTC8325 LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPF
Newman LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPF
USA300_FPR3757 LTSNAHIVGISSQAAFSTQANAAHYGASKAGFYALMNALRLESPNLHIMTVNVGPIDTPF
************************************************************
COL HQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE
N315 HQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE
NCTC8325 HQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE
Newman HQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE
USA300_FPR3757 HQKADPSMKYAKKMGEIMLDANQLAEDIIYGIKTKQLEINRPKWMHHALKMYQIAPRFFE
************************************************************
COL RCFPKLFKNKA
N315 RCFPKLFKNKA
NCTC8325 RCFPKLFKNKA
Newman RCFPKLFKNKA
USA300_FPR3757 RCFPKLFKNKA
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