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Pangenome04-0298108BA0217611819-97685071193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004095000
- symbol?: —
- description?: FtsK/SpoIIIE family protein
- FtsK/SpoIIIE family protein
- cell division protein FtsK
- FtsK/SpoIIIE family cell division protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4372902..4374588
- synteny block?: BlockID0031250
- occurrence?: in 27% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_12350
JH1:
—
JH9:
—
JKD6008:
SAA6008_02635
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1292
MSHR1132:
SAMSHR1132_15350
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02810 (thrB)
TCH60:
—
TW20:
SATW20_27170
USA300_TCH1516:
USA300HOU_0630
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL chromosome | |
| USA300_FPR3757 chromosome |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAMNEIALFKGVRIQPYQKYIDFMFASVLAFIFLVYRIYILFIDYKSVNKKLDILTLFAY
USA300_FPR3757 MAMNEIALFKGVRIQPYQKYIDFMFASVLAFIFLVYRIYILFIDYKSVNKKLDILTLFAY
************************************************************
COL FKPHLLYLLIGTAIIFVICKLIAQLLIRFKTKDLAEMIETQGFHNRTVIKKTTEYIPIDY
USA300_FPR3757 FKPHLLYLLIGTAIIFVICKLIAQFLIRFKTKDLAEMIETQGFHNRTVIKKTTEYIPIDY
************************:***********************************
COL KQTEYDYYPTMFYKRGKKTFVIHIKKDGSRFQDNYLELETIIEPMFNSELVEKKHIGRYL
USA300_FPR3757 KQTEYDYYPTMFYKRGKKSFVIHIKKDGSRFQDNYLELETIIEPMFNSELVEKKHIGRYL
******************:*****************************************
COL RYEFMPLKYKKRIVMNGEQESNTIFYDTKIAITHQITWDFVKAPHGLVTGITGGGKTYFL
USA300_FPR3757 RYEFMPLKYKKRIVMNGEQESNTIFYDTKIAITHQITWDFVKAPHGLVTGITGGGKTYFL
************************************************************
COL FYVIRELFRRHSEVRLLDPKVSDLSFMKRVIGDDKVADTKGQILKQLREANNEMEERFRL
USA300_FPR3757 FYVIRELFRRHSEVRLLDPKVSDLSFMKRVIGDDKVADTKGQILKQLREANNEMEERFRL
************************************************************
COL MNDSSDYKIGNDFRNFDMRPYFIIFDEVTAFTSTLDKKELQEMNDYLINIIMKGRQAGVF
USA300_FPR3757 MNDSSDYKIGNDFRNFDMRPYFIIFDEVTAFTSTLDKKELQEMNDYLINIIMKGRQAGVF
************************************************************
COL MFLTAQRPDADVIKGNVRDQLGLRVSLGNLSNDGYRMTFGQTDKEFQTIHDSDIGRGYIT
USA300_FPR3757 MFLTAQRPDADVIKGNVRDQLGLRVSLGNLSNDGYRMTFGQTDKEFQTIHDSDIGRGYIS
***********************************************************:
COL ILGQYNEPILFDAPLMEQYDFVEDVKQILNKE
USA300_FPR3757 ILGQYNEPILFDAPLMEQYDFVEDVKQILNKE
********************************