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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004150000
- symbol?: cdd
- synonym:
- description?: cytidine deaminase
- strand?: -
- coordinates?: 4418423..4418827
- synteny block?: BlockID0031800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1526 (cdd)
08BA02176:
C248_1611 (cdd)
11819-97:
MS7_1585 (cdd)
6850:
RSAU_001433 (cdd)
71193:
ST398NM01_1633
ECT-R 2:
ECTR2_1418 (cdd)
ED133:
SAOV_1568 (cdd)
ED98:
SAAV_1560 (cdd)
HO 5096 0412:
SAEMRSA15_14880 (cdd)
JH1:
SaurJH1_1660
JH9:
SaurJH9_1626
JKD6008:
SAA6008_01538 (cdd)
JKD6159:
SAA6159_01503 (cdd)
LGA251:
SARLGA251_14740 (cdd)
M013:
M013TW_1583
MRSA252:
SAR1645 (cdd)
MSHR1132:
SAMSHR1132_14080
MSSA476:
SAS1506
Mu3:
SAHV_1555 (cdd)
Mu50:
SAV1568 (cdd)
MW2:
MW1520 (cdd)
RF122:
SAB1440c (cdd)
ST398:
SAPIG1633 (cdd)
T0131:
SAT0131_01664 (tilS)
TCH60:
HMPREF0772_11572 (cdd)
TW20:
SATW20_15640 (cdd)
USA300_TCH1516:
USA300HOU_1569 (cdd)
VC40:
SAVC_07090
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASL
N315 MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASL
NCTC8325 MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASL
Newman MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASL
USA300_FPR3757 MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASL
************************************************************
COL VSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTV
N315 VSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTV
NCTC8325 VSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTV
Newman VSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTV
USA300_FPR3757 VSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTV
************************************************************
COL AELLPFGFSGKDLE
N315 AELLPFGFSGKDLE
NCTC8325 AELLPFGFSGKDLE
Newman AELLPFGFSGKDLE
USA300_FPR3757 AELLPFGFSGKDLE
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