PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004200000
• symbol^?: —
• synonym:
• description^?: acetyl-CoA carboxylase biotin carboxylase subunit

  descriptions from strain specific annotations:

  • acetyl-CoA carboxylase biotin carboxylase subunit
  • acetyl-CoA biotin carboxylase
  • acetyl-CoA carboxylase, biotin carboxylase
  • acetyl-CoA carboxylase biotin carboxylase
  • putative biotin carboxylase subunit of acetyl-CoA carboxylase
  • acetyl-CoA carboxylase
  • acetyl-CoA carboxylase, biotin carboxylase, putative
  • acetyl-CoA carboxylase biotin carboxylase subunit, AccC_1
  • biotin carboxylase (Acetyl-CoA carboxylase subunit A) (ACC)
  • Carbamoyl-phosphate synthase L chain, ATP-binding protein
  • carbamoyl-phosphate synthase L chain, N-terminal domain protein
  • carbamoyl-phosphate synthase L chain ATP-binding
  • carbamoyl-phosphate synthase subunit L
• strand^?: -
• coordinates^?: 4455502..4456227
• synteny block^?: BlockID0032290
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1661
N315:
SA1434
NCTC8325:
SAOUHSC_01709
Newman:
NWMN_1507 (accC)
USA300_FPR3757:
SAUSA300_1563 (accC)
04-02981:
SA2981_1564 (accC)
08BA02176:
C248_1648
11819-97:
MS7_1622
6850:
RSAU_001468 (accC2)
71193:
ST398NM01_1670
ECT-R 2:
ECTR2_1455
ED133:
SAOV_1604 (accC_1)
ED98:
SAAV_1598
HO 5096 0412:
SAEMRSA15_15240
JH1:
SaurJH1_1697
JH9:
SaurJH9_1663
JKD6008:
SAA6008_01576 (accC_1)
JKD6159:
SAA6159_01539 (accC_1)
LGA251:
SARLGA251_15090
M013:
M013TW_1622
MRSA252:
SAR1685
MSHR1132:
SAMSHR1132_14430
MSSA476:
SAS1542
Mu3:
SAHV_1593
Mu50:
SAV1606
MW2:
MW1556
RF122:
SAB1477c (accC)
ST398:
SAPIG1670
T0131:
SAT0131_01702
TCH60:
HMPREF0772_11535 (accC)
TW20:
SATW20_16010
USA300_TCH1516:
USA300HOU_1606
VC40:
SAVC_07280

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLADQAICIGEANALDSYL
  N315            MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLADQAICIGEANALDSYL
  NCTC8325        MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLADQAICIGEANALDSYL
  Newman          MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLADQAICIGEANALDSYL
  USA300_FPR3757  MLRCLIANRGEIAVRIIRACREYGIETVAVYAKGDEQSLHVHLADQAICIGEANALDSYL
                  ************************************************************
  
  COL             NIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFIGPTKKTMEMMGDKITARQ
  N315            NIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFIGPTKKTMEMMGDKITARQ
  NCTC8325        NIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFIGPTKKTMEMMGDKITARQ
  Newman          NIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFIGPTKKTMEMMGDKITARQ
  USA300_FPR3757  NIDRIISAAQITGANAIHPGYGFLSESTKFAQTVEEQGIAFIGPTKKTMEMMGDKITARQ
                  ************************************************************
  
  COL             TVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAASGGGGKGIRIVKKAEDLEKAF
  N315            TVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAASGGGGKGIRIVKKAEDLEKAF
  NCTC8325        TVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAASGGGGKGIRIVKKAEDLEKAF
  Newman          TVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAASGGGGKGIRIVKKAEDLEKAF
  USA300_FPR3757  TVHHAGVPVIPGSNGAVNHVSEIENLAKDIGYPVVIKAASGGGGKGIRIVKKAEDLEKAF
                  ************************************************************
  
  COL             KEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQDNYVHLGERDCSVQRKNQKLIEE
  N315            KEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQDNYVHLGERDCSVQRKNQKLIEE
  NCTC8325        KEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQDNYVHLGERDCSVQRKNQKLIEE
  Newman          KEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQDNYVHLGERDCSVQRKNQKLIEE
  USA300_FPR3757  KEAKSEGKKYFDDDRVYVEAFIPVAKHVEVQVMGDGQDNYVHLGERDCSVQRKNQKLIEE
                  ************************************************************
  
  COL             SPCAALTEERRQQICNDAVKVARAANYRSAGTIEFLVTDTAHYFIEMNARIQVEHTVTEM
  N315            SPCAALTEERRQQICNDAVKVARAANYRSAGTIEFLVTDTAHYFIEMNARIQVEHTVTEM
  NCTC8325        SPCAALTEERRQQICNDAVKVARAANYRSAGTIEFLVTDTAHYFIEMNARIQVEHTVTEM
  Newman          SPCAALTEERRQQICNDAVKVARAANYRSAGTIEFLVTDTAHYFIEMNARIQVEHTVTEM
  USA300_FPR3757  SPCAALTEERRQQICNDAVKVARAANYRSAGTIEFLVTDTAHYFIEMNARIQVEHTVTEM
                  ************************************************************
  
  COL             RAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIEARINAENPEKKFQPTPGKVTALHLPQ
  N315            RAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIEARINAENPEKKFQPTPGKVTALHLPQ
  NCTC8325        RAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIEARINAENPEKKFQPTPGKVTALHLPQ
  Newman          RAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIEARINAENPEKKFQPTPGKVTALHLPQ
  USA300_FPR3757  RAERDLVAAQLYLLEHNHLPFSQSDIQFNGHVIEARINAENPEKKFQPTPGKVTALHLPQ
                  ************************************************************
  
  COL             GFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSHDRASAIDKLKVTLDEMVIDGFSTTADFL
  N315            GFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSHDRASAIDKLKVTLDEMVIDGFSTTADFL
  NCTC8325        GFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSHDRASAIDKLKVTLDEMVIDGFSTTADFL
  Newman          GFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSHDRASAIDKLKVTLDEMVIDGFSTTADFL
  USA300_FPR3757  GFNVRVDSLLYHGYQVSPYYDSLVAKVIVKSHDRASAIDKLKVTLDEMVIDGFSTTADFL
                  ************************************************************
  
  COL             YAVLNYPLYRDGDAKDVDIKFLEKHQIVKGVEL
  N315            YAVLNYPLYRDGDAKDVDIKFLEKHQIVKGVEL
  NCTC8325        YAVLNYPLYRDGDAKDVDIKFLEKHQIVKGVEL
  Newman          YAVLNYPLYRDGDAKDVDIKFLEKHQIVKGVEL
  USA300_FPR3757  YAVLNYPLYRDGDAKDVDIKFLEKHQIVKGVEL
                  *********************************