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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004204000
- symbol?: —
- synonym:
- description?: allophanate hydrolase
- allophanate hydrolase
- allophanate hydrolase subunit 2
- biotin-dependent carboxyltransferase family protein
- allophanate hydrolase 2 subunit 2
- biotin-dependent carboxylase
- urea carboxylase
- urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4457338..4458252
- synteny block?: BlockID0032320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1566
08BA02176:
C248_1650
11819-97:
MS7_1624
6850:
RSAU_001470
71193:
ST398NM01_1672
ECT-R 2:
ECTR2_1457
ED133:
SAOV_1606
ED98:
SAAV_1600
HO 5096 0412:
SAEMRSA15_15260
JH1:
SaurJH1_1699
JH9:
SaurJH9_1665
JKD6008:
SAA6008_01578 (ahs2)
JKD6159:
SAA6159_01541 (AHS2)
LGA251:
SARLGA251_15110
M013:
M013TW_1627
MRSA252:
SAR1687
MSHR1132:
SAMSHR1132_14450
MSSA476:
SAS1544
Mu3:
SAHV_1595
Mu50:
SAV1608
MW2:
MW1558
RF122:
SAB1479c
ST398:
SAPIG1672
T0131:
SAT0131_01704 (rpoC)
TCH60:
HMPREF0772_11533
TW20:
SATW20_16030
USA300_TCH1516:
USA300HOU_1608
VC40:
SAVC_07290
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSIKILQPGLFSTVQDLGRIGYEHIGFSGAGAMDQFSFKVAQSLINNDGPAIEYTLIGPT
N315 MSIKILQPGLFSTVQDLGRIGYEHIGFSGAGAMDQFSFKVAQSLINNDGPAIEYTLIGPT
NCTC8325 --------------------------------MDQFSFKVAQSLINNDGPAIEYTLIGPT
Newman MSIKILQPGLFSTVQDLGRIGYEHIGFSGAGAMDQFSFKVAQSLINNDGPAIEYTLIGPT
USA300_FPR3757 --------------------------------MDQFSFKVAQSLINNDGPAIEYTLIGPT
****************************
COL IQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIGAITKGARGYLTFGHSINV
N315 IQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIGAITKGVRGYLTFGHSINV
NCTC8325 IQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIGAITKGARGYLTFGHSINV
Newman IQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIGAITKGARGYLTFGHSINV
USA300_FPR3757 IQFNTQNTFVITGGSINASLNNKTISMNSVILAEKGDILKIGAITKGARGYLTFGHSINV
***********************************************.************
COL PSIAESYATHTRSSIGGFKGRKLLADDVITVKINNDFKENIGKTIHLQDDLLPENNIIHI
N315 PSIAESYATHTRSSIGGFKGRKLLANDVITVKINNDFKENIGKTIHLQDDLLPENNIIHI
NCTC8325 PSIAESYATHTRSSIGGFKGRKLLADDVITVKINNDFKENIGKTIHLQDDLLPENNIIHI
Newman PSIAESYATHTRSSIGGFKGRKLLADDVITVKINNDFKENIGKTIHLQDDLLPENNIIHI
USA300_FPR3757 PSIAESYATHTRSSIGGFKGRKLLADDVITVKINNDFKENIGKTIHLQDDLLPENNIIHI
*************************:**********************************
COL LQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQV
N315 LQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQV
NCTC8325 LQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQV
Newman LQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQV
USA300_FPR3757 LQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQV
************************************************************
COL PNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPQDTIQFKWISFQEAVDKNREQM
N315 PNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPKDTIQFKWISFQEAVDKNREQM
NCTC8325 PNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPQDTIQFKWISFQEAVDKNREQM
Newman PNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPQDTIQFKWISFQEAVDKNREQM
USA300_FPR3757 PNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPQDTIQFKWISFQEAVDKNREQM
**************************************:*********************
COL SLFNEILKSHQKTPIFDTSSLRHTSKKLATILKGDL
N315 SLFNEILKSHQKTPIFDTSSLRHTSKKLSTILKGDL
NCTC8325 SLFNEILKSHQKTPIFDTSSLRHTSKKLATILKGDL
Newman SLFNEILKSHQKTPIFDTSSLRHTSKKLATILKGDL
USA300_FPR3757 SLFNEILKSHQKTPIFDTSSLRHTSKKLATILKGDL
****************************:*******