PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004240000
• symbol^?: apt
• synonym:
• description^?: adenine phosphoribosyltransferase
• strand^?: -
• coordinates^?: 4486885..4487403
• synteny block^?: BlockID0032680
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1690 (apt)
N315:
SA1461 (apt)
NCTC8325:
SAOUHSC_01743
Newman:
NWMN_1537 (apt)
USA300_FPR3757:
SAUSA300_1591 (apt)
04-02981:
SA2981_1593 (apt)
08BA02176:
C248_1678 (apt)
11819-97:
MS7_1650 (apt)
6850:
RSAU_001496 (apt)
71193:
ST398NM01_1698
ECT-R 2:
ECTR2_1483 (apt)
ED133:
SAOV_1632 (apt)
ED98:
SAAV_1628 (apt)
HO 5096 0412:
SAEMRSA15_15520 (apt)
JH1:
SaurJH1_1725
JH9:
SaurJH9_1692
JKD6008:
SAA6008_01604 (apt)
JKD6159:
SAA6159_01567 (apt)
LGA251:
SARLGA251_15370 (apt)
M013:
M013TW_1655
MRSA252:
SAR1715 (apt)
MSHR1132:
SAMSHR1132_14710
MSSA476:
SAS1571
Mu3:
SAHV_1622 (apt)
Mu50:
SAV1635 (apt)
MW2:
MW1585 (apt)
RF122:
SAB1504c (apt)
ST398:
SAPIG1698 (apt)
T0131:
SAT0131_01734
TCH60:
HMPREF0772_11507 (apt)
TW20:
SATW20_16290 (apt)
USA300_TCH1516:
USA300HOU_1633 (apt)
VC40:
SAVC_07420

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
  N315            MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
  NCTC8325        MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
  Newman          MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
  USA300_FPR3757  MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
                  ************************************************************
  
  COL             IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
  N315            IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
  NCTC8325        IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
  Newman          IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
  USA300_FPR3757  IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
                  ************************************************************
  
  COL             LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
  N315            LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
  NCTC8325        LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
  Newman          LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
  USA300_FPR3757  LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
                  ****************************************************