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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004352000
- symbol?: pde2
- synonym: nrnA
- description?: bifunctional oligoribonuclease/PAP phosphatase NrnA
- bifunctional oligoribonuclease/PAP phosphatase NrnA
- Exopolyphosphatase-related protein
- pApA hydrolase Pde2
- Phosphoesterase, DHH family protein
- DHH/DHHA1 domain protein
- DHHA1 domain protein
- DHH family phosphoesterase
- exopolyphosphatase-like protein
- phosphoesterase domain-containing protein
- RecJ-like phosphoesterase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4593921..4594862
- synteny block?: BlockID0033570
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1662
08BA02176:
C248_1745
11819-97:
MS7_1710
6850:
RSAU_001561
71193:
ST398NM01_1757
ECT-R 2:
ECTR2_1544
ED133:
SAOV_1691
ED98:
SAAV_1713
HO 5096 0412:
SAEMRSA15_16130
JH1:
SaurJH1_1794
JH9:
SaurJH9_1760
JKD6008:
SAA6008_01672
JKD6159:
SAA6159_01627
LGA251:
SARLGA251_15950
M013:
M013TW_1716
MRSA252:
SAR1782
MSHR1132:
SAMSHR1132_15540
MSSA476:
SAS1631
Mu3:
SAHV_1690
Mu50:
SAV1704
MW2:
MW1647
RF122:
SAB1562c
ST398:
SAPIG1757
T0131:
SAT0131_01807
TCH60:
HMPREF0772_11448
TW20:
SATW20_16950
USA300_TCH1516:
USA300HOU_1690
VC40:
SAVC_07730
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSL
N315 MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSL
NCTC8325 MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSL
Newman MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSL
USA300_FPR3757 MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSL
************************************************************
COL SFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLIKIDHHPAVDQYGDINLVN
N315 SFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGSKLIKIDHHPAVDQYGDINLVN
NCTC8325 SFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLIKIDHHPAVDQYGDINLVN
Newman SFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLIKIDHHPAVDQYGDINLVN
USA300_FPR3757 SFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGRKLIKIDHHPAVDQYGDINLVN
************************************** *********************
COL TNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIG
N315 TNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIG
NCTC8325 TNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIG
Newman TNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIG
USA300_FPR3757 TNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIG
************************************************************
COL HDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQF
N315 HDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQF
NCTC8325 HDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQF
Newman HDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQF
USA300_FPR3757 HDIDHNALLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQF
************************************************************
COL VNTIADIKGLKIWVFAVDEGNEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVDSWDE
N315 VNTIADIKGLKIWVFAVDEGSEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVNSWDE
NCTC8325 VNTIADIKGLKIWVFAVDEGNEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVDSWDE
Newman VNTIADIKGLKIWVFAVDEGNEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVDSWDE
USA300_FPR3757 VNTIADIKGLKIWVFAVDEGNEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVDSWDE
********************.**********************************:****
COL FEQLATALRTKLN
N315 FEQLATALRTKLN
NCTC8325 FEQLATALRTKLN
Newman FEQLATALRTKLN
USA300_FPR3757 FEQLATALRTKLN
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