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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004385000
- symbol?: ptaA
- synonym:
- description?: PTS glucose transporter subunit IIBC
- PTS glucose transporter subunit IIBC
- phosphotransferase system, N-acetylglucosamine-specific IIBC component
- PTS system, IIBC components
- PTS system, N-acetylglucosamine-specific IIABC component
- PTS system, N-acetylglucosamine-specific IIBC component
- PTS system N-acetylglucosamine-specific transporter subunit IIABC
- PTS family porter component IIBC
- PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component
- PTS system, N-acetylglucosamine-specific IIBC subunit
- PTS system IIBC component
- PTS system N-acetylglucosamine-specific IIABC component
- PTS system N-acetylglucosamine-specific transporter subunit IIBC
- PTS system transporter subunit IIBC
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4623423..4624889
- synteny block?: BlockID0033890
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1684 (ptaA)
08BA02176:
C248_1768
11819-97:
MS7_1732 (nagE)
6850:
RSAU_001582 (ptaA)
71193:
ST398NM01_1778
ECT-R 2:
ECTR2_1566 (nagE)
ED133:
SAOV_1712
ED98:
SAAV_1736
HO 5096 0412:
SAEMRSA15_16340
JH1:
SaurJH1_1816
JH9:
SaurJH9_1781
JKD6008:
SAA6008_01694 (ptaA)
JKD6159:
SAA6159_01649 (ptaA)
LGA251:
SARLGA251_16160
M013:
M013TW_1740
MRSA252:
SAR1803
MSHR1132:
SAMSHR1132_15760
MSSA476:
SAS1652
Mu3:
SAHV_1712 (ptaA)
Mu50:
SAV1726 (ptaA)
MW2:
MW1668 (ptaA)
RF122:
SAB1584c
ST398:
SAPIG1778 (nagE)
T0131:
SAT0131_01829 (pbp4)
TCH60:
HMPREF0772_11427 (nagE)
TW20:
SATW20_17160
USA300_TCH1516:
USA300HOU_1715
VC40:
SAVC_07835
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILF
N315 MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILF
NCTC8325 MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILF
Newman MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILF
USA300_FPR3757 MYKFFQNLGRSLMLPVAILPAAAIIAGIGNTLNALHATPKIAMFFTTVGTTILEQLGILF
************************************************************
COL AIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVF
N315 AIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVF
NCTC8325 AIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVF
Newman AIGVAIGMAKKNDGAVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVF
USA300_FPR3757 AIGVAIGMAKKNDGVVALAATLGYFLVTVVLSPMKLAPLLGMKASEINSAFEKMNNGNVF
**************.*********************************************
COL VGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWI
N315 VGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWI
NCTC8325 VGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWI
Newman VGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWI
USA300_FPR3757 VGIVIGLIAAYAYNKFSETELPLALSFFSGKRLVPIMTAFYCTFLVVILLFLWPLLYSWI
************************************************************
COL VKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKG
N315 VKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKG
NCTC8325 VKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKG
Newman VKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKG
USA300_FPR3757 VKFGESIVGLGSFGAFIYGVANRLLIPTGLHHALNSVFWFDTIGINDIGKFQSGKDAIKG
************************************************************
COL ITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAF
N315 ITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAF
NCTC8325 ITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAF
Newman ITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAF
USA300_FPR3757 ITGRYQAGFFPIMMFGIPAAALAMYHTAKTTQKKQVYGWFLASSVAAFFVGVTEPIEFAF
************************************************************
COL MFVAPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGV
N315 MFVAPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGV
NCTC8325 MFVVPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGV
Newman MFVAPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGV
USA300_FPR3757 MFVAPILYVVHALLTGLSLFIAATFHWTAGFSFSAGLIDYVLSLINPVSNHPLMLLVQGV
***.********************************************************
COL VFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILE
N315 VFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILE
NCTC8325 VFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILE
Newman VFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILE
USA300_FPR3757 VFFILYYVIFRVVIQVFNLNTIGRGENELVDPTVVKDNIAPGENDIKQSKYHQHAIQILE
************************************************************
COL GLGGQENIVNLTNCATRLRLELKDTSIIDKQKIKNAGAVGVTVNGKHSTQVIVGTHVQQV
N315 GLGGQENIVNLTNCATRLRLELKDTSIIDQQKIKNAGAVGVTVNGKHSTQVIVGTHVQQV
NCTC8325 GLGGQENIVNLTNCATRLRLELKDTSIIDKQKIKNAGAVGVTVNGKHSTQVIVGTHVQQV
Newman GLGGQENIVNLTNCATRLRLELKDTSIIDKQKIKNAGAVGVTVNGKHSTQVIVGTHVQQV
USA300_FPR3757 GLGGQENIVNLTNCATRLRLELKDTSIIDKQKIKNAGAVGVTVNGKHSTQVIVGTHVQQV
*****************************:******************************
COL ADEIEKHL
N315 ADEIEKHL
NCTC8325 ADEIEKHL
Newman ADEIEKHL
USA300_FPR3757 ADEIEKHL
********