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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004414000
- symbol?: —
- synonym:
- description?: MBL fold metallo-hydrolase
- MBL fold metallo-hydrolase
- metallo-beta-lactamase
- metallo-beta-lactamase superfamily protein
- metal-dependent hydrolase
- beta-lactamase domain-containing protein
- metallo-beta-lactamase family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4661540..4662114
- synteny block?: BlockID0034180
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1705
08BA02176:
C248_1792
11819-97:
MS7_1753
6850:
RSAU_001604
71193:
ST398NM01_1800
ECT-R 2:
ECTR2_1587
ED133:
SAOV_1733
ED98:
SAAV_1757
HO 5096 0412:
SAEMRSA15_16550
JH1:
SaurJH1_1837
JH9:
SaurJH9_1802
JKD6008:
SAA6008_01718
JKD6159:
SAA6159_01670
LGA251:
SARLGA251_16370
M013:
M013TW_1761
MRSA252:
SAR1825
MSHR1132:
SAMSHR1132_15970
MSSA476:
SAS1673
Mu3:
SAHV_1733
Mu50:
SAV1747
MW2:
MW1690
RF122:
SAB1607c
ST398:
SAPIG1800
T0131:
SAT0131_01855
TCH60:
HMPREF0772_11406
TW20:
SATW20_17370
USA300_TCH1516:
USA300HOU_1737
VC40:
SAVC_07945
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ----------------------MFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNL
N315 MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNL
NCTC8325 MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNL
Newman MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNL
USA300_FPR3757 MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNL
**************************************
COL IIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ
N315 IIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ
NCTC8325 IIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ
Newman IIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ
USA300_FPR3757 IIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQ
************************************************************
COL AGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVLGIKMQ
N315 AGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQ
NCTC8325 AGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVLGIKMQ
Newman AGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVLGIKMQ
USA300_FPR3757 AGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVLGIKMQ
****************************************************** *****
COL HSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYF
N315 HSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYF
NCTC8325 HSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYF
Newman HSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYF
USA300_FPR3757 HSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYF
************************************************************
COL IQQQYWFLFYHDENYFAVKYSDNGENIDAYILRETLVDNN
N315 IQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN
NCTC8325 IQQQYWFLFYHDENYFAVKYSDNGENIDAYILRETLVDNN
Newman IQQQYWFLFYHDENYFAVKYSDNGENIDAYILRETLVDNN
USA300_FPR3757 IQQQYWFLFYHDENYFAVKYSDNGENIDAYILRETLVDNN
**********************:*****************