PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004455000
• symbol^?: ribH
• synonym:
• description^?: 6,7-dimethyl-8-ribityllumazine synthase
• strand^?: -
• coordinates^?: 4702607..4703216
• synteny block^?: BlockID0034520
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1817 (ribH)
N315:
SA1586 (ribH)
NCTC8325:
SAOUHSC_01886 (ribH)
Newman:
NWMN_1659 (ribH)
USA300_FPR3757:
SAUSA300_1712 (ribH)
04-02981:
SA2981_1723 (ribH)
08BA02176:
C248_1813 (ribH)
11819-97:
MS7_1771 (ribH)
6850:
RSAU_001622 (ribH)
71193:
ST398NM01_1819
ECT-R 2:
ECTR2_1605 (ribH)
ED133:
SAOV_1751 (ribH)
ED98:
SAAV_1777 (ribH)
HO 5096 0412:
SAEMRSA15_16740 (ribH)
JH1:
SaurJH1_1855 (ribH)
JH9:
SaurJH9_1820 (ribH)
JKD6008:
SAA6008_01740 (ribH)
JKD6159:
SAA6159_01688 (ribH)
LGA251:
SARLGA251_16550 (ribH)
M013:
M013TW_1781
MRSA252:
SAR1850 (ribH)
MSHR1132:
SAMSHR1132_16150
MSSA476:
SAS1691 (ribH)
Mu3:
SAHV_1753 (ribH)
Mu50:
SAV1767 (ribH)
MW2:
MW1708 (ribH)
RF122:
SAB1625c (ribH)
ST398:
SAPIG1819 (ribH)
T0131:
SAT0131_01882
TCH60:
HMPREF0772_11386 (ribH)
TW20:
SATW20_17580 (ribH)
USA300_TCH1516:
USA300HOU_1757 (ribH)
VC40:
SAVC_08045 (ribH)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
  N315            MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
  NCTC8325        MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
  Newman          MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
  USA300_FPR3757  MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
                  ************************************************************
  
  COL             VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
  N315            VAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
  NCTC8325        VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
  Newman          VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
  USA300_FPR3757  VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
                  *************:**********************************************
  
  COL             EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
  N315            EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
  NCTC8325        EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
  Newman          EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
  USA300_FPR3757  EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
                  **********************************