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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004456000
- symbol?: ribA
- synonym:
- description?: riboflavin biosynthesis protein
- riboflavin biosynthesis protein
- riboflavin biosynthesis protein RibBA
- 3,4-dihydroxy-2-butanone-4-phosphate synthase
- 3,4-dihydroxy-2-butanone-4-phosphate synthase-GTP cyclohydrolase II
- 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II
- bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
- riboflavin biosynthesis protein ribAB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4703229..4704410
- synteny block?: BlockID0034530
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1724 (ribA)
08BA02176:
C248_1814 (ribA)
11819-97:
MS7_1772 (ribA)
6850:
RSAU_001623 (ribBA)
71193:
ST398NM01_1820
ECT-R 2:
ECTR2_1606 (ribB)
ED133:
SAOV_1752 (ribA)
ED98:
SAAV_1778 (ribBA)
HO 5096 0412:
SAEMRSA15_16750 (ribA)
JH1:
SaurJH1_1856
JH9:
SaurJH9_1821
JKD6008:
SAA6008_01741 (ribA)
JKD6159:
SAA6159_01689 (ribA)
LGA251:
SARLGA251_16560 (ribA)
M013:
M013TW_1782
MRSA252:
SAR1851 (ribA)
MSHR1132:
SAMSHR1132_16160
MSSA476:
SAS1692
Mu3:
SAHV_1754 (ribA)
Mu50:
SAV1769 (ribA)
MW2:
MW1709 (ribA)
RF122:
SAB1626c (ribA)
ST398:
SAPIG1820
T0131:
SAT0131_01883
TCH60:
HMPREF0772_11385 (ribBA)
TW20:
SATW20_17590 (ribA)
USA300_TCH1516:
USA300HOU_1758 (ribA)
VC40:
SAVC_08050
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQFDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPV
N315 MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPV
NCTC8325 MQFDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPV
Newman MQFDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPV
USA300_FPR3757 MQFDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPV
*****************.******************************************
COL SKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDF
N315 SKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDF
NCTC8325 SKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDF
Newman SKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDF
USA300_FPR3757 SKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDF
************************************************************
COL NRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF
N315 NRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNF
NCTC8325 NRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF
Newman NRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF
USA300_FPR3757 NRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF
**********************************************************:*
COL KEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKG
N315 KEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKG
NCTC8325 KEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKG
Newman KEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKG
USA300_FPR3757 KEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKG
************************************************************
COL AIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNK
N315 AIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNK
NCTC8325 AIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNK
Newman AIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNK
USA300_FPR3757 AIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNK
************************************************************
COL LRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQY
N315 LRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQY
NCTC8325 LRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQY
Newman LRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQY
USA300_FPR3757 LRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQY
************************************************************
COL GIDIAERIEVIVPETVHNHDYMETKKIKMGHLI
N315 GIDIAERIEVIVPETVHNHDYMVTKKIKMGHLI
NCTC8325 GIDIAERIEVIVPETVHNHDYMETKKIKMGHLI
Newman GIDIAERIEVIVPETVHNHDYMETKKIKMGHLI
USA300_FPR3757 GIDIAERIEVIVPETVHNHDYMETKKIKMGHLI
********************** **********