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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004505000
- symbol?: tnp2
- synonym:
- description?: IS200/IS605 family transposase
- IS200/IS605 family transposase
- IS200 family transposase
- IS200 family transposase, putative
- putative transposase
- transposase
- IS605/IS200-like transposase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4736384..4736785
- synteny block?: BlockID0034960
- occurrence?: in 30% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
RSAU_002142
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_01767
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_01907
TCH60:
—
TW20:
SATW20_17810
USA300_TCH1516:
USA300HOU_1779
VC40:
SAVC_08170
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACK
NCTC8325 MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACK
Newman MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACK
USA300_FPR3757 ----------------------------MIYGKIKKDIGIILRQLCERKGVEIIEAEACK
:*******************************
COL DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
NCTC8325 DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
Newman DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
USA300_FPR3757 DHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRKFWCKGFYVDTVGRNK
************************************************************
COL KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
NCTC8325 KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
Newman KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
USA300_FPR3757 KVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNKKRKKKE
*****************************************