Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004510000
- symbol?: menC
- synonym:
- description?: o-succinylbenzoate synthase
- o-succinylbenzoate synthase
- o-succinylbenzoic acid synthetase
- o-succinylbenzoic acid (OSB) synthetase
- o-succinylbenzoic acid synthetase, putative
- L-alanine-DL-glutamate epimerase/enolase superfamily-like protein
- NAAAR, N-acylamino acid racemase
- O-succinylbenzoate-CoA synthase
- o-succinylbenzoic acid (OSB) synthetase, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4738947..4739948
- synteny block?: BlockID0035010
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1751 (menC)
08BA02176:
C248_1840
11819-97:
MS7_1794 (menC)
6850:
RSAU_001648 (menC)
71193:
ST398NM01_1842
ECT-R 2:
ECTR2_1629 (menC)
ED133:
SAOV_1776
ED98:
SAAV_1805
HO 5096 0412:
SAEMRSA15_17030
JH1:
SaurJH1_1882
JH9:
SaurJH9_1846
JKD6008:
SAA6008_01771
JKD6159:
SAA6159_01713
LGA251:
SARLGA251_16790
M013:
M013TW_1805
MRSA252:
SAR1876
MSHR1132:
SAMSHR1132_16400
MSSA476:
SAS1716
Mu3:
SAHV_1781 (menC)
Mu50:
SAV1796 (menC)
MW2:
MW1734 (menC)
RF122:
SAB1650c
ST398:
SAPIG1842 (menC)
T0131:
SAT0131_01911
TCH60:
HMPREF0772_11361 (menC)
TW20:
SATW20_17850
USA300_TCH1516:
USA300HOU_1783
VC40:
SAVC_08190
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHET
N315 MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHET
NCTC8325 MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHET
Newman MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHET
USA300_FPR3757 MKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHET
************************************************************
COL IASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPSFSVA
N315 IASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPSFSVA
NCTC8325 IASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPSFSVA
Newman IASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPSFSVA
USA300_FPR3757 IASVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPSFSVA
************************************************************
COL YGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLRELDFHFQLVIDANESLDRQD
N315 YGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLRELDFHFQLVIDANESLDRQD
NCTC8325 YGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLRELDFHFQLVIDANESLDRQD
Newman YGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLRELDFHFQLVIDANESLDRQD
USA300_FPR3757 YGATASGLSNKQLESLKATKPTRIKLKWTPQIMHQIRVLRELDFHFQLVIDANESLDRQD
************************************************************
COL FTQLQLLAREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVV
N315 FTQLQLLAREQVLYIEEPFKDISMLDEVVDGTIPPIALDEKATSLLDIINLIELYNVKVV
NCTC8325 FTQLQLLAREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVV
Newman FTQLQLLAREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVV
USA300_FPR3757 FTQLQLLAREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVV
****************************.*******************************
COL VLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAMLARKGDYPGDVTPAGY
N315 VLKPFRLGGIDKVQTAIDTLKSHGVKVVIGGMYEYGLSRYFTAMLARKGDYPGDVTPAGY
NCTC8325 VLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAMLARKGDYPGDVTPAGY
Newman VLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAMLARKGDYPGDVTPAGY
USA300_FPR3757 VLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAMLARKGDYPGDVTPAGY
************************.***********************************
COL YFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY
N315 YFDQDVVTKSGILKEGRLEFRPPLVDITQLQPY
NCTC8325 YFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY
Newman YFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY
USA300_FPR3757 YFEQDVVAHSGILKEGRLEFRPPLVDITQLQPY
**:****::************************