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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004512000
- symbol?: —
- synonym:
- description?: DUF4909 domain-containing protein
- DUF4909 domain-containing protein
- lipoprotein, putative
- putative lipoprotein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4741591..4742032
- synteny block?: BlockID0035030
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1753
08BA02176:
C248_1842
11819-97:
MS7_1796
6850:
RSAU_001650
71193:
ST398NM01_1845
ECT-R 2:
ECTR2_1632
ED133:
SAOV_1778
ED98:
SAAV_1807
HO 5096 0412:
SAEMRSA15_17050
JH1:
SaurJH1_1884
JH9:
SaurJH9_1848
JKD6008:
SAA6008_01773
JKD6159:
SAA6159_01715
LGA251:
SARLGA251_16810
M013:
M013TW_1807
MRSA252:
SAR1878
MSHR1132:
SAMSHR1132_16420
MSSA476:
SAS1718
Mu3:
SAHV_1783
Mu50:
SAV1798
MW2:
MW1736
RF122:
SAB1652c
ST398:
SAPIG1845
T0131:
SAT0131_01913
TCH60:
HMPREF0772_11359
TW20:
SATW20_17870
USA300_TCH1516:
USA300HOU_1785
VC40:
SAVC_08200
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKFLKFKGMKICLMLYLLIFLSSCSTNNKIVGQRFEIQQHNETIGSIYFSADYAHIRGI
N315 MKKFLKFKGMKICLMLYLLIFLSSCGTNNKIVGQRFEIQQHNETIGSIYFSADYAHIRGI
NCTC8325 ---------MKICLMLYLLIFLSSCSTNNKIVGQRFEIQQHNETIGSIYFSADYAHIRGI
Newman MKKFLKFKGMKICLMLYLLIFLSSCSTNNKIVGQRFEIQQHNETIGSIYFSADYAHIRGI
USA300_FPR3757 ---------MKICLMLYLLIFLSSCSTNNKIVGQRFEIQQHNETIGSIYFSADYAHIRGI
****************.**********************************
COL EKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYLIENLDDEVF
N315 EKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYLIENLDDEVF
NCTC8325 EKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYLIENLDDEVF
Newman EKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYLIENLDDEVF
USA300_FPR3757 EKGTAKYFIDKVGSKRYLFIEYIPDNVLNCKPDFWKTLKYKKDKVTYYVYLIENLDDEVF
************************************************************
COL HLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN
N315 HLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN
NCTC8325 HLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN
Newman HLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN
USA300_FPR3757 HLSALQDMNRIPIDIADDVATMGKSPHQNDRMTLKLNKNN
****************************************