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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004516000
- symbol?: —
- synonym:
- description?: DUF4352 domain-containing protein
- DUF4352 domain-containing protein
- putative lipoprotein with DUF4352
- membrane protein
- telomeric repeat-binding factor 2 family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4743207..4744259
- synteny block?: BlockID0035070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1755
08BA02176:
C248_1844
11819-97:
MS7_1798
6850:
RSAU_001652
71193:
ST398NM01_1868
ECT-R 2:
ECTR2_1634
ED133:
SAOV_1780
ED98:
SAAV_1809
HO 5096 0412:
SAEMRSA15_17070
JH1:
SaurJH1_1886
JH9:
SaurJH9_1850
JKD6008:
SAA6008_01775
JKD6159:
SAA6159_01717
LGA251:
SARLGA251_16830
M013:
M013TW_1809
MRSA252:
SAR1880
MSHR1132:
SAMSHR1132_16440
MSSA476:
SAS1720
Mu3:
SAHV_1785
Mu50:
SAV1800
MW2:
MW1738
RF122:
SAB1654
ST398:
SAPIG1868
T0131:
SAT0131_01916 (gntP)
TCH60:
HMPREF0772_11357
TW20:
SATW20_17890
USA300_TCH1516:
USA300HOU_1787
VC40:
SAVC_08210
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGCGGCLVLFILIIIGISA
N315 MSNQFKSEEERRQWEQFQAFQNQQNQQHQQYGQKKSKKGWFWGCGGCLVLFILIIIGISA
NCTC8325 MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGCGGCLVLFILIIIGISA
Newman MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGCGGCLVLFILIIIGISA
USA300_FPR3757 MSNQFKSEEERRQWEQFQAFQNQQNQQNQQYGQKKSKKGWFWGCGGCLVLFILIIIGISA
***************************:********************************
COL CTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETMKSVGPSLAPTNAKGIFVV
N315 CTAGVTGNLGGNSSKEANKTHKIGETVKNGDLEVTVNSVETMKSVGPSLAPTNAKGIFVV
NCTC8325 CTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETMKSVGPSLAPTNAKGIFVV
Newman CTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETMKSVGPSLAPTNAKGIFVV
USA300_FPR3757 CTAGITGNLGGNSSKETNKTHKIGETVKNGDLEVTVNSVETMKSVGPSLAPTNAKGIFVV
****:***********:*******************************************
COL ADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSANQSDNGSIENSFFLQRINPDS
N315 ADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSANQSDNGSIENSFFLQRINPDS
NCTC8325 ADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSANQSDNGSIENSFFLQRINPDS
Newman ADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSANQSDNGSIENSFFLQRINPDS
USA300_FPR3757 ADVTIKNKGKEALTIDSSMFKLKSGDKTFEADNTGSMSANQSDNGSIENSFFLQRINPDS
************************************************************
COL TAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKDKQDTEVAVAS
N315 TAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKDKQDTEVAVAS
NCTC8325 TAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKDKQDTEVAVAS
Newman TAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKDKQDTEVAVAS
USA300_FPR3757 TAQGKIVFDVSENIANAKDKKLEVISSLFSVKKITFDLSDAKKTSKAKKDKQDTEVAVAS
************************************************************
COL SNSDNVSYEASATTPATTSSADTDSEDSEKSSKDEDKQNASKSDKSSVEKSESNEETAPV
N315 SNSDNVNYEASATTPATTSSADTDSEDSEKSSKDEDKQNASKSDKSSVEKSESNEETATV
NCTC8325 SNSDNVSYEASATTPATTSSADTDSEDSEKSSKDEDKQNASKSDKSSVEKSESNEETAPV
Newman SNSDNVSYEASATTPATTSSADTDSEDSEKSSKDEDKQNASKSDKSSVEKSESNEETAPV
USA300_FPR3757 SNSDNVSYEASATTPATTSSADTDSEDSEKSSKDEDKQNASKSDKSSVEKSESNEETAPV
******.***************************************************.*
COL EPMPHSKPTTSEAPPSQNIHNEDSMYDASTE
N315 EPMPQSKPTTSEAPPSQNNHNENNMYDASTE
NCTC8325 EPMPHSKPTTSEAPPSQNIHNEDSMYDASTE
Newman EPMPHSKPTTSEAPPSQNIHNEDSMYDASTE
USA300_FPR3757 EPMPHSKPTTSEAPPSQNIHNEDSMYDASTE
****:************* ***:.*******