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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004549000
- symbol?: —
- synonym:
- description?: probable exported protein
- probable exported protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4768223..4768531
- synteny block?: BlockID0035390
- occurrence?: in 55% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_1857
11819-97:
—
6850:
—
71193:
ST398NM01_1881
ECT-R 2:
—
ED133:
SAOV_1788
ED98:
—
HO 5096 0412:
SAEMRSA15_17180
JH1:
—
JH9:
—
JKD6008:
SAA6008_01784
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1893
MSHR1132:
—
MSSA476:
SAS1728
Mu3:
—
Mu50:
—
MW2:
MW1748
RF122:
—
ST398:
SAPIG1881
T0131:
SAT0131_01925
TCH60:
HMPREF0772_11344
TW20:
SATW20_17990
USA300_TCH1516:
USA300HOU_1797
VC40:
SAVC_08260
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKKYLMIVIIILILILGGIFLKMKYDEKKYYDEQKERITIYMKYNVKGYKNISFANFKE
NCTC8325 ------MIVIIILILILGGIFLKMKYDEKKYYDEQKERITIYMKYNVKGYKNISFANFKE
Newman MNKKYLMIVIIILILILGGIFLKMKYDEKKYYDEQKERITIYMKYNVKGYKNISFANFKE
USA300_FPR3757 MNKKYLMIVIIILILILGGIFLKMKYDEKKYYDEQKERITIYMKYNVKGYKNISFANFKE
******************************************************
COL NPMDGYSISGYINNDKKLSFTAGIRSVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQ
NCTC8325 NPMDGYSISGYINNDKKLSFTAGIRSVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQ
Newman NPMDGYSISGYINNDKKLSFTAGIRSVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQ
USA300_FPR3757 NPMDGYSISGYINNDKKLSFTAGIRSVDDFQFDTDISYTDELGRKFNKNPKSVSEIKKEQ
************************************************************
COL NTSNK
NCTC8325 NTSNK
Newman NTSNK
USA300_FPR3757 NTSNK
*****