PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004573000
• symbol^?: epiE
• synonym:
• description^?: epidermin immunity protein F

  descriptions from strain specific annotations:

  • epidermin immunity protein F
  • lantibiotic ABC transporter protein
  • lantibiotic epidermin immunity protein F
  • epidermin ABC transporter membrane protein
  • lantibiotic immunity protein
  • lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein
  • putative lantibiotic ABC transporter protein
  • transport protein
• strand^?: -
• coordinates^?: 4805753..4806514
• synteny block^?: BlockID0035600
• occurrence^?: in 42% of 33 strains

⊟Orthologs

COL:
SACOL1872 (epiE)
N315:
—
NCTC8325:
SAOUHSC_01947
Newman:
NWMN_1710 (bsaE)
USA300_FPR3757:
SAUSA300_1761 (epiE)
04-02981:
—
08BA02176:
—
11819-97:
MS7_1817
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_1801
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_17000
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1740
Mu3:
—
Mu50:
—
MW2:
MW1759 (bsaE)
RF122:
SAB1677c
ST398:
—
T0131:
SAT0131_01938
TCH60:
—
TW20:
SATW20_18140
USA300_TCH1516:
USA300HOU_1809 (epiE)
VC40:
SAVC_08320

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MIHLKIEGIKFKNSFSMYVLLISPLVFLCFAIFTVLFAKSNTGTANSVSPYITLLFNIWP
  NCTC8325        MIHLKIEGIKFKNSFSMYVLLISPLVFLCFAIFTVLFAKSNTGTANSVSPYITLLFNIWP
  Newman          MIHLKIEGIKFKNSFSMYVLLISPLVFLCFAIFTVLFAKSNTGTANSVSPYITLLFNIWP
  USA300_FPR3757  MIHLKIEGIKFKNSFSMYVLLISPLVFLCFAIFTVLFAKSNTGTANSVSPYITLLFNIWP
                  ************************************************************
  
  COL             IAFIPIVLCMACNSLFKIEMRNKSFNYYLSNNWSITKEIRAKIFILSIAFLVHCFLVFII
  NCTC8325        IAFIPIVLCMACNSLFKIEMRNKSFNYYLSNNWSITKEIRAKIFILSIAFLVHCFLVFII
  Newman          IAFIPIVLCMACNSLFKIEMRNKSFNYYLSNNWSITKEIRAKIFILSIAFLVHCFLVFII
  USA300_FPR3757  IAFIPIVLCMACNSLFKIEMRNKSFNYYLSNNWSITKEIRAKIFILSIAFLVHCFLVFII
                  ************************************************************
  
  COL             AYIGDLIINPHPVNAMLLLVTILLMYVVSLPLIPLNFLLTRYFGVFVSILINLVLSVICV
  NCTC8325        AYIGDLIINPHPVNAMLLLVTILLMYVVSLPLIPLNFLLTRYFGVFVSILINLVLSVICV
  Newman          AYIGDLIINPHPVNAMLLLVTILLMYVVSLPLIPLNFLLTRYFGVFVSILINLVLSVICV
  USA300_FPR3757  AYIGDLIINPHPVNAMLLLVTILLMYVVSLPLIPLNFLLTRYFGVFVSILINLVLSVICV
                  ************************************************************
  
  COL             LFLTLKSLFWVLPWGIMQRIPLITLGILPNGLVVNHNSKYFNDLNALYISIIVSIIIFAI
  NCTC8325        LFLTLKSLFWVLPWGIMQRIPLITLGILPNGLVVNHNSKYFNDLNALYISIIVSIIIFAI
  Newman          LFLTLKSLFWVLPWGIMQRIPLITLGILPNGLVVNHNSKYFNDLNALYISIIVSIIIFAI
  USA300_FPR3757  LFLTLKSLFWVLPWGIMQRIPLITLGILPNGLVVNHNSKYFNDLNALYISIIVSIIIFAI
                  ************************************************************
  
  COL             VTFLNNKKSWRLK
  NCTC8325        VTFLNNKKSWRLK
  Newman          VTFLNNKKSWRLK
  USA300_FPR3757  VTFLNNKKSWRLK
                  *************