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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004784000
- symbol?: fumC
- synonym:
- description?: class II fumarate hydratase
- class II fumarate hydratase
- fumarate hydratase
- fumarate hydratase class-II
- fumarate hydratase, class-II
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4994289..4995674
- synteny block?: BlockID0037160
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1807 (citG)
08BA02176:
C248_1894 (citG)
11819-97:
MS7_1856 (fumC)
6850:
RSAU_001710 (fumC)
71193:
ST398NM01_1917
ECT-R 2:
ECTR2_1693 (fumC)
ED133:
SAOV_1848 (citG)
ED98:
SAAV_1870 (fumC)
HO 5096 0412:
SAEMRSA15_17560 (citG)
JH1:
SaurJH1_1939 (fumC)
JH9:
SaurJH9_1905 (fumC)
JKD6008:
SAA6008_01808 (fumC)
JKD6159:
SAA6159_01779 (fumC)
LGA251:
SARLGA251_17340 (citG)
M013:
M013TW_1857
MRSA252:
SAR1942 (fumC)
MSHR1132:
SAMSHR1132_16970
MSSA476:
SAS1772 (fumC)
Mu3:
SAHV_1836 (fumC)
Mu50:
SAV1851 (fumC)
MW2:
MW1792 (fumC)
RF122:
SAB1784c (fumC)
ST398:
SAPIG1917 (fumC)
T0131:
SAT0131_01971
TCH60:
HMPREF0772_11293 (fumC)
TW20:
SATW20_18450 (citG)
USA300_TCH1516:
USA300HOU_1845 (fumC)
VC40:
SAVC_08500 (fumC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAAIANFD
N315 MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAALANFD
NCTC8325 MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAAIANFD
Newman MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAAIANFD
USA300_FPR3757 MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAAIANFD
*******************************************************:****
COL LGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDH
N315 LGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDH
NCTC8325 LGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDH
Newman LGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDH
USA300_FPR3757 LGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDH
************************************************************
COL QSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSII
N315 QIDESIHPNDDVNESQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFESII
NCTC8325 QSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSII
Newman QSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSII
USA300_FPR3757 QSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSII
* ***********:******************************************:***
COL KIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEF
N315 KIGRTHLQDATPIKLGQEISGWRYMLDRCEIMLSESKKHILNLAIGGTAVGTGINAHPEF
NCTC8325 KIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEF
Newman KIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEF
USA300_FPR3757 KIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEF
****************************** *****************************
COL GDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGP
N315 GDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGP
NCTC8325 GDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGP
Newman GDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGP
USA300_FPR3757 GDKVAHYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGP
************************************************************
COL RAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYK
N315 RAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYK
NCTC8325 RAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYK
Newman RAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYK
USA300_FPR3757 RAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYK
************************************************************
COL PVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAA
N315 PVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAA
NCTC8325 PVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAA
Newman PVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAA
USA300_FPR3757 PVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAA
************************************************************
COL QIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
N315 QIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
NCTC8325 QIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
Newman QIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
USA300_FPR3757 QIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
*****************************************