Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004845000
- symbol?: —
- synonym:
- description?: aromatic acid exporter family protein
- aromatic acid exporter family protein
- integral membrane protein
- membrane protein
- putative lipo protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5052647..5053832
- synteny block?: BlockID0037750
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1821
08BA02176:
C248_1936
11819-97:
MS7_1900
6850:
RSAU_001752
71193:
ST398NM01_1958
ECT-R 2:
ECTR2_1736
ED133:
SAOV_1892
ED98:
SAAV_1915
HO 5096 0412:
SAEMRSA15_17720
JH1:
SaurJH1_1953
JH9:
SaurJH9_1919
JKD6008:
SAA6008_01822
JKD6159:
SAA6159_01796
LGA251:
SARLGA251_17470
M013:
M013TW_1899
MRSA252:
SAR1955
MSHR1132:
SAMSHR1132_17100
MSSA476:
SAS1787
Mu3:
SAHV_1850
Mu50:
SAV1865
MW2:
MW1805
RF122:
SAB1798
ST398:
SAPIG1958
T0131:
SAT0131_01987
TCH60:
HMPREF0772_11279
TW20:
SATW20_18590
USA300_TCH1516:
USA300HOU_1860
VC40:
SAVC_08580
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGN
N315 MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGN
NCTC8325 -----------------MSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGN
Newman MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGN
USA300_FPR3757 -----------------MSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGN
*******************************************
COL IIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFY
N315 IIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFY
NCTC8325 IIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFY
Newman IIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFY
USA300_FPR3757 IIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFY
************************************************************
COL ITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNN
N315 ITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNN
NCTC8325 ITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNN
Newman ITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNN
USA300_FPR3757 ITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNN
************************************************************
COL IKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKL
N315 IKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKL
NCTC8325 IKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKL
Newman IKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKL
USA300_FPR3757 IKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKL
************************************************************
COL SRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLL
N315 SRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLL
NCTC8325 SRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLL
Newman SRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLL
USA300_FPR3757 SRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLL
************************************************************
COL STFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEE
N315 STFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEE
NCTC8325 STFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEE
Newman STFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEE
USA300_FPR3757 STFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEE
************************************************************
COL DFDL
N315 DFDL
NCTC8325 DFDL
Newman DFDL
USA300_FPR3757 DFDL
****