PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004940000
• symbol^?: scpB
• synonym:
• description^?: staphostatin A

  descriptions from strain specific annotations:

  • staphostatin A
  • staphostatin A superfamily protein
  • Staphostatin like protein
• strand^?: +
• coordinates^?: 5130716..5131066
• synteny block^?: BlockID0038450
• occurrence^?: in 73% of 33 strains

⊟Orthologs

COL:
SACOL1971
N315:
SA1726
NCTC8325:
SAOUHSC_02129
Newman:
NWMN_1848
USA300_FPR3757:
—
04-02981:
SA2981_1867
08BA02176:
C248_1985
11819-97:
—
6850:
—
71193:
ST398NM01_2004
ECT-R 2:
—
ED133:
SAOV_2012
ED98:
SAAV_1976
HO 5096 0412:
SAEMRSA15_18170
JH1:
SaurJH1_1999
JH9:
SaurJH9_1965
JKD6008:
—
JKD6159:
SAA6159_01841 (sspA)
LGA251:
—
M013:
—
MRSA252:
SAR2002
MSHR1132:
—
MSSA476:
SAS1833
Mu3:
SAHV_1895
Mu50:
SAV1910
MW2:
MW1851
RF122:
SAB1846
ST398:
SAPIG2004
T0131:
SAT0131_02037
TCH60:
HMPREF0772_11232
TW20:
—
USA300_TCH1516:
USA300HOU_1911
VC40:
SAVC_08810

⊟Genome Viewer

COL
N315
NCTC8325
Newman

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINTEH
  N315            MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINTEH
  NCTC8325        MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINTEH
  Newman          MEQIELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINTEH
                  ************************************************************
  
  COL             KQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHKS
  N315            KQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHKS
  NCTC8325        KQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHKS
  Newman          KQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHKS
                  ************************************************