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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005050000
- symbol?: —
- synonym:
- description?: phi77 ORF100-like protein
- phi77 ORF100-like protein
- putative bacteriophage protein
- phage protein
- Phi77 hypothetical protein
- phi77 protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5218159..5218439
- synteny block?: BlockID0039280
- occurrence?: in 41% of 34 strains
tacL (gpGT) : serogroup F prophage tail assembly chaperone large subunit [1]
Staphylococcal prophages require tail assembly chaperone proteins (TACs) to coat the tape measure protein and prevent asynchronized and unstructured major tail tube protein binding. They will then nucleate major tail tube protein polymerization and be displaced by major tail tube protein subunits in orderly tail tube assembly. This large subunit actually originates from SAUPAN005052000 and is generated via a 1% frequency programmed translational frameshift at the A AAT TTT slippery coding sequence. This results in ribosomal slippage to the +3 reading frame and a 179 amino acid protein.
⊟Orthologs[edit | edit source]
COL:
—
N315:
—
NCTC8325:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
RSAU_000607
71193:
ST398NM01_2920
ECT-R 2:
ECTR2_1828
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18710
JH1:
SaurJH1_2047
JH9:
SaurJH9_2011
JKD6008:
SAA6008_02010
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
SAR2051
MSHR1132:
SAMSHR1132_17960
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02089
TCH60:
HMPREF0772_11185
TW20:
SATW20_19480
USA300_TCH1516:
USA300HOU_1960
VC40:
—
⊟Genome Viewer[edit | edit source]
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Jun Xu, Roger W Hendrix, Robert L Duda
Conserved translational frameshift in dsDNA bacteriophage tail assembly genes.
Mol Cell: 2004, 16(1);11-21
[PubMed:15469818] [WorldCat.org] [DOI] (P p)Lisa G Pell, Nichole Cumby, Teresa E Clark, Ashleigh Tuite, Kevin P Battaile, Aled M Edwards, Nickolay Y Chirgadze, Alan R Davidson, Karen L Maxwell
A conserved spiral structure for highly diverged phage tail assembly chaperones.
J Mol Biol: 2013, 425(14);2436-49
[PubMed:23542344] [WorldCat.org] [DOI] (I p)