PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005052000
• symbol^?: —
• synonym:
• description^?: putative bacteriophage protein

  descriptions from strain specific annotations:

  • putative bacteriophage protein
  • phage protein
• strand^?: -
• coordinates^?: 5218493..5219882
• synteny block^?: BlockID0039290
• occurrence^?: in 58% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1767
NCTC8325:
—
Newman:
NWMN_1889
USA300_FPR3757:
SAUSA300_1932
04-02981:
SA2981_1917
08BA02176:
—
11819-97:
—
6850:
RSAU_000606
71193:
ST398NM01_2921
ECT-R 2:
ECTR2_1829
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18720
JH1:
SaurJH1_2048
JH9:
SaurJH9_2012
JKD6008:
SAA6008_02011
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2052
MSHR1132:
SAMSHR1132_17970
MSSA476:
—
Mu3:
SAHV_1942
Mu50:
SAV1956
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02090
TCH60:
HMPREF0772_11184
TW20:
SATW20_19490
USA300_TCH1516:
USA300HOU_1961
VC40:
—

⊟Genome Viewer

N315
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLIDDIEDENSTMKPREIAD
  Newman          MAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLIDDIEDENSTMKPREIAD
  USA300_FPR3757  MAKLKRNIIQLVEDPKANEIKLQTYLTPHFISFEIVYEAMDLIDDIEDENSTMKPREIAD
                  ************************************************************
  
  N315            RLMDMVVKIYDNQFTVKDLKERMHAPDGMNALREQVIFITQGQQTEETRNFIQNMK
  Newman          RLMDMVVKIYDNQFTVKDLKERMHAPDGMNALREQVIFITQGQQTEETRNFIQNMK
  USA300_FPR3757  RLMDMVVKIYDNQFAVKDLKERMHAPDGMNALREQVVFITQGQQTEETRNFIQNMK
                  **************:*********************:*******************