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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005055000
- symbol?: —
- synonym:
- description?: phage tail protein
- phage tail protein
- phage major tail protein
- phi77 ORF020-like protein, phage major tail protein
- Phi13 family phage major tail protein
- Phage_hypothetical protein
- phage major tail protein, phi13 family protein
- prophage pi2 protein 39
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5219932..5222395
- synteny block?: BlockID0039310
- occurrence?: in 55% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1919
08BA02176:
—
11819-97:
—
6850:
RSAU_000604
71193:
ST398NM01_2923
ECT-R 2:
ECTR2_1831
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18730
JH1:
SaurJH1_2050
JH9:
SaurJH9_2014
JKD6008:
SAA6008_02013
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2054
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_1943
Mu50:
SAV1957
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02092
TCH60:
HMPREF0772_11182
TW20:
SATW20_19500
USA300_TCH1516:
USA300HOU_1962
VC40:
—
⊟Genome Viewer[edit | edit source]
N315 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGELKTAYADGG
Newman MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGDLKTAYADGG
USA300_FPR3757 MVVKQASAPKAYFNITGLGFAKLTKEGAKLEYSDITKTRGLQKIGVETGGDLKTAYADGG
*.**:*******:***************:*:*******************:*********
N315 PIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRD
Newman PIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEDGVYKETQGKQNNYVAIWFRQERRD
USA300_FPR3757 PIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEYGVYKETQGKQNNYVAIWFRQERRD
*******************************:*** ***:*.*********:********
N315 GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMT
Newman GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMT
USA300_FPR3757 GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFDSANMT
******************************************:*****************
N315 NHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL
Newman NHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL
USA300_FPR3757 NHSGNGEKGEEAFLKKILGEEYTGNVTEDNGETL
**.*:***********************.* ***