PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005055000
• symbol^?: —
• synonym:
• description^?: phage tail protein

  descriptions from strain specific annotations:

  • phage tail protein
  • phage major tail protein
  • phi77 ORF020-like protein, phage major tail protein
  • Phi13 family phage major tail protein
  • Phage_hypothetical protein
  • phage major tail protein, phi13 family protein
  • prophage pi2 protein 39
  • pseudogene
• strand^?: -
• coordinates^?: 5219932..5222395
• synteny block^?: BlockID0039310
• occurrence^?: in 55% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1768
NCTC8325:
—
Newman:
NWMN_1890
USA300_FPR3757:
SAUSA300_1934
04-02981:
SA2981_1919
08BA02176:
—
11819-97:
—
6850:
RSAU_000604
71193:
ST398NM01_2923
ECT-R 2:
ECTR2_1831
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18730
JH1:
SaurJH1_2050
JH9:
SaurJH9_2014
JKD6008:
SAA6008_02013
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2054
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_1943
Mu50:
SAV1957
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02092
TCH60:
HMPREF0772_11182
TW20:
SATW20_19500
USA300_TCH1516:
USA300HOU_1962
VC40:
—

⊟Genome Viewer

N315
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGELKTAYADGG
  Newman          MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGDLKTAYADGG
  USA300_FPR3757  MVVKQASAPKAYFNITGLGFAKLTKEGAKLEYSDITKTRGLQKIGVETGGDLKTAYADGG
                  *.**:*******:***************:*:*******************:*********
  
  N315            PIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRD
  Newman          PIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEDGVYKETQGKQNNYVAIWFRQERRD
  USA300_FPR3757  PIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEYGVYKETQGKQNNYVAIWFRQERRD
                  *******************************:*** ***:*.*********:********
  
  N315            GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMT
  Newman          GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMT
  USA300_FPR3757  GTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFDSANMT
                  ******************************************:*****************
  
  N315            NHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL
  Newman          NHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL
  USA300_FPR3757  NHSGNGEKGEEAFLKKILGEEYTGNVTEDNGETL
                  **.*:***********************.* ***