PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005271000
• symbol^?: —
• synonym:
• description^?: carbon-nitrogen family hydrolase

  descriptions from strain specific annotations:

  • carbon-nitrogen family hydrolase
  • hydrolase in agr operon
  • carbon-nitrogen hydrolase, putative
  • hydrolase
  • Aliphatic amidase amiE
  • amidohydrolase
  • beta-ureidopropionase
  • carbon-nitrogen hydrolase family protein
  • hydrolase in agr operon (ORF 5)
  • nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
  • putative carbon-nitrogen hydrolase
• strand^?: +
• coordinates^?: 5441067..5441854
• synteny block^?: BlockID0040720
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2021
N315:
SA1841
NCTC8325:
SAOUHSC_02259
Newman:
NWMN_1942
USA300_FPR3757:
SAUSA300_1987
04-02981:
SA2981_1975 (amiE)
08BA02176:
C248_2037
11819-97:
MS7_2046
6850:
RSAU_001865
71193:
ST398NM01_2071
ECT-R 2:
ECTR2_1885
ED133:
SAOV_2071
ED98:
SAAV_2081
HO 5096 0412:
SAEMRSA15_19420
JH1:
SaurJH1_2108
JH9:
SaurJH9_2071
JKD6008:
SAA6008_02072
JKD6159:
SAA6159_01948
LGA251:
SARLGA251_18360
M013:
M013TW_1986
MRSA252:
SAR2121
MSHR1132:
SAMSHR1132_18560
MSSA476:
SAS1940
Mu3:
SAHV_2019
Mu50:
SAV2034
MW2:
MW1958
RF122:
SAB1919
ST398:
SAPIG2071
T0131:
SAT0131_02181
TCH60:
HMPREF0772_11164
TW20:
SATW20_20170
USA300_TCH1516:
USA300HOU_2029
VC40:
SAVC_09050

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL
  N315            MKVQIYQLPIIFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL
  NCTC8325        MKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL
  Newman          MKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL
  USA300_FPR3757  MKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNL
                  **********:*************************************************
  
  COL             GQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREH
  N315            GQSFSFIKHLAEKYKVDIVAGSVSNIRNYQIFNTAFSVNKSGQLINEYDKVHLVPMLREH
  NCTC8325        GQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREH
  Newman          GQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREH
  USA300_FPR3757  GQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREH
                  **************************** *******************************
  
  COL             EFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHW
  N315            EFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHW
  NCTC8325        EFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHW
  Newman          EFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHW
  USA300_FPR3757  EFLTAGEYVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHW
                  ******* ****************************************************
  
  COL             HSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLN
  N315            HSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLN
  NCTC8325        HSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLN
  Newman          HSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLN
  USA300_FPR3757  HSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLN
                  ************************************************************
  
  COL             EVEQQRENIPVFKSIKLDLYK
  N315            EVEQQRENIPVFKSIKLDLYK
  NCTC8325        EVEQQRENIPVFKSIKLDLYK
  Newman          EVEQQRENIPVFKSIKLDLYK
  USA300_FPR3757  EVEQQRENIPVFKSIKLDLYK
                  *********************