PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005347000
• symbol^?: kdpC
• synonym:
• description^?: potassium-transporting ATPase subunit C

  descriptions from strain specific annotations:

  • potassium-transporting ATPase subunit C
  • K(+)-transporting ATPase subunit C
  • potassium-transporting ATPase, C subunit
  • potassium-transporting ATPase C chain
  • K+-transporting ATPase, C subunit
  • K+-transporting ATPase subunit C
  • P-ATPase superfamily P-type ATPase potassium (K+) transporter subunit C
  • Potassium-transporting ATPase C chain 1
  • putative potassium-transporting ATPase C chain
• strand^?: -
• coordinates^?: 5520189..5520699
• synteny block^?: BlockID0041440
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2066 (kdpC)
N315:
SA1879 (kdpC)
NCTC8325:
SAOUHSC_02310
Newman:
NWMN_1980 (kdpC)
USA300_FPR3757:
SAUSA300_2032 (kdpC)
04-02981:
SA2981_2016 (kdpC)
08BA02176:
C248_2087 (kdpC)
11819-97:
MS7_2092 (kdpC)
6850:
RSAU_001915 (kdpC)
71193:
ST398NM01_2116
ECT-R 2:
ECTR2_1931 (kdpC)
ED133:
SAOV_2117c
ED98:
SAAV_2129 (kdpC)
HO 5096 0412:
SAEMRSA15_19850 (kdpC)
JH1:
SaurJH1_2150
JH9:
SaurJH9_2112
JKD6008:
SAA6008_02114 (kdpC)
JKD6159:
SAA6159_01990 (kdpC)
LGA251:
SARLGA251_18780 (kdpC)
M013:
M013TW_2034
MRSA252:
SAR2163 (kdpC)
MSHR1132:
SAMSHR1132_19000
MSSA476:
SAS1980
Mu3:
SAHV_2060 (kdpC)
Mu50:
SAV2075 (kdpC)
MW2:
MW1999 (kdpC)
RF122:
SAB1960c (kdpC)
ST398:
SAPIG2116 (kdpC)
T0131:
SAT0131_02232 (argG)
TCH60:
HMPREF0772_11120 (kdpC)
TW20:
SATW20_22150 (kdpC)
USA300_TCH1516:
USA300HOU_2070 (kdpC)
VC40:
SAVC_09260

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWT
  N315            MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWT
  NCTC8325        MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWT
  Newman          MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWT
  USA300_FPR3757  MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWT
                  ************************************************************
  
  COL             ETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAA
  N315            ETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAA
  NCTC8325        ETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAA
  Newman          ETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAA
  USA300_FPR3757  ETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAA
                  ************************************************************
  
  COL             TSSESGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIA
  N315            TSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIA
  NCTC8325        TSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIA
  Newman          TSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIA
  USA300_FPR3757  TSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIA
                  *** ********************************************************
  
  COL             LDKMKD
  N315            LDKMKD
  NCTC8325        LDKMKD
  Newman          LDKMKD
  USA300_FPR3757  LDKMKD
                  ******